KEGG   Psychrobacter sp. G: PSYCG_10890
Entry
PSYCG_10890       CDS       T02715                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
pso  Psychrobacter sp. G
Pathway
pso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PSYCG_10890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pso03400]
    PSYCG_10890
Enzymes [BR:pso01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSYCG_10890
DNA repair and recombination proteins [BR:pso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PSYCG_10890
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII Helicase_C AAA_30 PriA_CRR AAA_22 AAA_19 PIF1 zinc-ribbons_6
Other DBs
NCBI-ProteinID: AGP49657
Position
2502326..2504707
AA seq 793 aa
MLSLFISPSLFLFHIDLIKLRSLFMLVQVALPVPLYRVFDYSLPSDISALPNASPNNSSI
QLPQIGSRVEVSFGRQTLIGIVVAHIAQVDTSVPLNKLKPINKCLDAESILDNSMLKLAY
WLARYYHYPLGEVLAVILPTLVRQGKPLDLLITHWRILPHITDDDFRTNAKKQKQQFDML
KLHGQHGASEDVLLLEGMERAFLKKLEDKGLIERYIQPKQAPTPVKLAKMPLDLNEEQQL
AVAAIVAAHESKCYTGFLLNGITGSGKTEVYLQAMQAVLEAGKQVLILVPEIGLTPQTRA
RFASRFAAHIVLLHSGINNTHRLQGWQDCRTGHAQIIIGTRSAVLYPFADLGLIIVDEAH
DGSYKQQDTLRYHAADVALYRGFQAKIPVVLGTATPSLEHLKLVDEGKLVECQLSTRPGN
AKPAPMQLIDARLQSTHQQTQDDGARYDTGLTDVLIGAIRQTLEAGDQVLIFLNRRGYAP
VLLCEACGWQADCPRCDAHLTVHYNNQAQRSNYSSNSYLKCHHCDWQAYIPTVCPDCGSQ
NLDAKGMGTTRLSENLHAIFANPQTSKALYPIIQIDRDTTRRKDSWENIYQRINEGNPAI
LVGTQMVAKGHHFPNVTLVCLPNADRGFLSADFRSPEHTAQLMIQVAGRAGRGDKSGRVL
IQTLQPDNALLLKLVKDGYLSFARELLQERKTMGLPPHSHAALIRCEGKTLAATTQALKD
AIAVLPTGHNLAVLGPIDAPMSKKNSRYHAQLLLLAKDRQQLHHVLNHWWQPVLTLPSAK
YLKLTLDIDPVGW
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgctaagcttattcatctctccctctttatttttatttcatattgacttaatcaaactg
cgaagcctttttatgttggtacaagttgctctgcccgtgcccctttatcgggtatttgac
tatagcctaccgtccgatataagtgctttgccaaatgcttcgccaaacaatagctcaata
caactgccgcaaattggcagtcgtgttgaggtgtcctttggtcgtcagactttaatcgga
atcgtggttgctcatattgcgcaagtggataccagcgtaccactcaataagctgaaaccc
attaataagtgtttagatgctgagtctattttagataacagcatgctaaagctcgcctat
tggcttgctcgttattatcattatccgcttggtgaggtgttagcggtcatcttgcccacg
ttggttcgtcaaggtaaaccactagatttactcattacccattggcggattctgccacat
atcactgatgacgactttcgtactaacgccaaaaagcaaaagcagcagtttgatatgcta
aagctacatggtcaacatggtgcaagtgaagatgtactactattagaaggtatggagcgt
gcttttttaaaaaaactagaagataagggtttgattgagcgctatattcaaccaaaacaa
gcacctactcctgtcaaattggcaaaaatgccccttgatcttaatgaggagcaacagctt
gccgttgcagcgattgttgctgcacatgaatccaaatgctacacgggctttttattaaat
ggcattaccggtagtggcaagactgaagtctatctacaagccatgcaagcagtattagag
gctggcaagcaagtgcttattttagtgcctgagattgggttaacaccgcagacgcgtgcg
cgttttgccagtcgcttcgctgcgcatatcgtcttgctacattctggtataaataacact
catcgattgcaaggttggcaagattgccgtacgggtcacgcacaaatcattattggtacg
cgttcggcagtactatatccgtttgcagatttaggcttaattatcgttgatgaagcgcat
gatggctcctataaacagcaggataccttgcgctatcatgctgctgatgtcgcactttat
cgaggattccaagccaaaataccggtggtccttggtacggctaccccttctcttgaacat
ttaaaattagtcgatgagggcaagctagtagagtgtcaattatcgacgcgccctggcaat
gctaaacctgcgcccatgcagctgattgatgctcgcttgcaaagtactcatcagcaaacg
caagatgatggcgcgcgctatgataccggactgacggatgtgcttatcggcgccataagg
caaaccctagaagctggcgatcaagttttgatatttttaaaccgtcgcggctatgcgcct
gttttattatgcgaggcgtgtggttggcaggcagattgtccgcgctgcgacgcgcattta
accgttcattataataatcaagcccagcgtagcaattattccagcaactcttatttaaaa
tgccatcattgtgattggcaagcctatattccgactgtatgccctgattgtggcagtcaa
aatctagatgccaaagggatgggaacaacaaggctaagcgaaaatttgcacgctatcttt
gccaatccgcaaaccagtaaagcgctttatcccattattcaaattgatcgtgataccact
aggcgtaaagacagctgggaaaatatctatcagcgtattaatgaaggaaatcctgccata
ttggtcggtacacaaatggttgccaaaggtcatcattttcccaatgtcacgctcgtttgc
ttacccaacgctgatcgtggctttttgtctgcagactttcgctcgccagagcatactgcc
caattgatgatccaagtagcagggcgtgcaggacgcggggataaatccggacgggtattg
attcaaacgctgcaaccggacaatgcgttattattaaaattggtgaaagacggttatttg
tcttttgctcgtgagctgttgcaagagcgtaaaacaatgggactgccccctcatagtcat
gctgcgctgatacgctgcgaaggtaaaacccttgctgccaccacacaagcactcaaagat
gccattgccgttctgccaacagggcacaatttagccgttcttggtcctatcgatgcgccc
atgagtaaaaagaacagtcgctatcatgcccagcttttgctattggccaaggatcggcag
caactgcatcatgttttaaatcattggtggcaacccgtccttaccctaccgagcgctaaa
tatcttaagcttactttagatattgatcctgtcggctggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system