KEGG   Paraclostridium sordellii: RSJ16_01705
Entry
RSJ16_01705       CDS       T05252                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
psor  Paraclostridium sordellii
Pathway
psor03030  DNA replication
psor03430  Mismatch repair
psor03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RSJ16_01705
   03430 Mismatch repair
    RSJ16_01705
   03440 Homologous recombination
    RSJ16_01705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psor03032]
    RSJ16_01705
   03400 DNA repair and recombination proteins [BR:psor03400]
    RSJ16_01705
Enzymes [BR:psor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RSJ16_01705
DNA replication proteins [BR:psor03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RSJ16_01705
DNA repair and recombination proteins [BR:psor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RSJ16_01705
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon Rubrerythrin
Other DBs
NCBI-ProteinID: AUN13004
Position
257478..260963
AA seq 1161 aa
MSKDFVHLHVHTEYSLLDGFSRVKNLVARAKELNMSAVAITDHGCMFGAIDFFKVAKAEG
IKPIIGCEVYTAPRSMRDKDPNYDKSQGHLILLAKDMQGYQNLIKLVSEAYVQGFYYKPR
VDIDEISKYSEGIIALSACLAGDVSQALMNRNYEKAKSIALRYKEIFGEDNYYIEIQDHN
LPEQKEVNSELIKLSKEIGVGLVATNDVHYVRKEDSKIHDILMCIQMGKTVNDPARMRFG
SDEFYLKSRQEMESVFPDVQEALDNTVKIAQRCNVEFDFNTIHLPKYDVPSGYTPNEYLR
MLCFKGLKERYENPSKEILERLEYELGVIEKMGYVEYFLITWDFINFARENSIMVGPGRG
SAAGSIVSYTLYITDIDPIKYSLLFERFLNPERISMPDIDIDFCYERREEVIDYVKRKYG
DDHVAQIITFGTMGAKAAIRDVGRVLDVSYNKVDNIAKEIPFALGMTIDKALDTNPNLRK
LYEEDGETKEIIDVSRKIEGMLRHASTHAAGVVISKKPIDEYVPLYKHQDAITTQFTMTT
LEELGLLKMDFLGLRTLTVIRDALDLIEKNHNVKINFSTMEYDDPKVYELLASGNTLGVF
QLESTGMRSFMKQLKPDNFEDIVAGISLYRPGPMDSIPNYINNKNNPEHVEYLHEKLKPI
MEVTYGCLVYQEQVMQVVRDLGGYSYGRSDLVRRAMGKKKMDVMEKERQYFIHGKFDDNG
ELEIEGCVRNGVPEDIGNKIFDDMIDFAKYAFNKSHAAAYGVLAYETAYLKAHYPVEFMA
ALITSVMGNTDKVVEYIRECNNLKIDVLKPDINKSFTKFSVEYNSIRFGLAAVKNVGVNV
LNNIIAEREAGGEFKDFNEFCKRLDSKDSNKRIIESLIKCGAFDEMGDNRASLLLGYEKL
LESISMDRKKNLAGQVSLFDGFGMDESMSNDIQNMYTLPKVNELEEKERLYLEKEVLGMY
VSGHPLSQYKEELKKNTTINNADLNDLKDDYVRYLNLNEKEVVMGGIIVNKTIRTTKRND
LMAIIELEDLYGVIEVIVFPQVLQKYNTIIQEDKIIYVEGRLSIKEDENAKLIAREIRDM
STESNQHKPNLYLKISSIEDKELVNDLISIVTKYPGDNDVYIYAENIKQMYKWNHIKVNI
NENLIDELKHILPKTSIKVKI
NT seq 3486 nt   +upstreamnt  +downstreamnt
ttgagcaaagattttgttcatttacatgttcatacagaatatagtttgctggatggtttt
tctagagttaaaaacttagtagcaagagctaaagaattaaatatgagtgcagttgcaata
actgatcatggttgtatgtttggagctatagattttttcaaagtagctaaggcagaggga
ataaagcctataataggatgtgaagtttatacagcgcctagaagcatgagagataaagat
ccaaactatgataaatctcagggacatttgatacttctagctaaagatatgcaaggttat
caaaaccttataaaattagtatcagaagcttatgtacaaggcttttactataaacctaga
gttgatatagatgaaataagtaaatatagtgaaggaattattgccttatcagcttgtcta
gcaggggatgtttctcaagctcttatgaatagaaattatgaaaaagctaaaagcatagct
ttaagatataaagagatatttggtgaagataattactatattgaaatacaagatcataat
ttaccagaacaaaaagaggtaaatagtgaattgataaaactatcaaaggaaattggagta
ggattggttgctacaaatgatgttcattatgttagaaaagaagattcaaaaatacatgat
atattaatgtgtattcaaatgggaaaaacagttaatgatcctgctagaatgagatttggt
agtgatgaattttatttaaaatcaaggcaagaaatggagtctgtattcccggatgtacaa
gaagcattagataatacagtaaagattgcacaaagatgtaatgtagaatttgactttaat
acaatacatttaccaaaatatgatgtacctagcggatatactcctaatgaatatttaaga
atgttatgttttaaaggtttaaaagaaagatatgaaaatccatcaaaagaaattttagag
agattagaatatgaattaggtgtaatagaaaaaatggggtacgttgagtattttcttata
acttgggactttattaactttgcaagagaaaatagtataatggttggaccaggaagagga
agtgctgcaggttctatagtttcatatactttatatataacagacatagacccaataaaa
tattctcttttatttgaaagatttcttaatcctgagcgtatatctatgccagatatcgat
atagatttctgttatgaaagaagagaagaagttattgattatgtaaaaagaaaatatgga
gatgatcatgtagctcaaataataacatttggaactatgggagctaaagcggctataaga
gatgtaggtagagttttagatgttagctataataaagttgataatatagctaaagaaata
ccatttgcattaggaatgactatagataaggccttagatactaatccaaatttaagaaaa
ctatatgaagaagatggagaaactaaagagataattgatgtttctagaaaaatagaaggt
atgttaaggcatgcatcgacacatgctgcaggagtagttatatctaaaaagccaattgat
gaatatgtacctttatataaacatcaagatgcaataacgacacaatttacaatgacgact
ctagaagagttaggacttttaaaaatggactttttagggcttagaactttaaccgttata
agagatgctcttgatttaattgaaaaaaatcacaatgttaaaattaatttttcaactatg
gagtacgatgatccaaaggtttatgaattacttgcatcaggtaatacattaggggtgttc
caattagaaagtactggaatgagaagtttcatgaaacaattaaagccagataattttgag
gacatagtggcgggaatatcgctatatagaccaggaccaatggattctatacctaactat
ataaataacaaaaacaatcctgagcatgtagaatacctacatgagaaactaaaacctata
atggaagttacttacggatgcttagtttatcaagaacaagtaatgcaggttgttagagat
ttaggtggatatagctatggacgtagtgacctagttagaagagctatgggtaagaaaaaa
atggatgtaatggagaaggaaagacaatacttcatacatggcaagtttgatgataatggg
gaactagagatagaaggttgtgtaagaaatggagttccagaagatatagggaataaaata
tttgatgatatgatagactttgctaaatatgcatttaataaaagtcatgctgcggcatat
ggagtattagcttatgaaacagcatatctaaaagcacactatccagtggaatttatggcg
gcgcttataaccagtgttatgggaaatacagataaagttgttgagtatataagagaatgt
aataatcttaaaatagatgtattaaaaccagatataaataaaagttttactaagttctct
gttgaatataatagtataagatttggtttagcagcagttaaaaatgtaggagtgaatgtt
ttaaataatattattgctgaaagagaagctggcggagaatttaaggattttaatgagttt
tgcaaaagactagactctaaagattctaataagcgtataatagaaagtcttattaaatgt
ggagcttttgatgagatgggagataatagggccagtttactattagggtatgaaaaatta
ttagagagcatatctatggatagaaagaaaaacttagcaggacaagtttcattgtttgat
ggatttggaatggatgaatctatgagtaatgatattcaaaatatgtatacattgcctaag
gttaacgaattagaagaaaaagaaagattatatttagaaaaagaagttttaggaatgtat
gtaagtggtcatccattatctcagtacaaagaggaattaaagaaaaatacaacaataaat
aatgctgatttaaacgatttaaaagatgattatgttagatacttaaatttaaatgaaaaa
gaagttgttatgggaggaattatagttaataaaactataaggactacgaagagaaatgat
ttaatggctataattgaattagaagatttatatggtgttattgaagtaattgtattcccg
caagtacttcaaaaatacaatactataatccaagaagataaaattatttatgtagaagga
agattaagtataaaagaggatgaaaatgcaaaacttatagctagagaaataagagatatg
agtacggaatcaaatcaacataagcctaacttatatttaaagatatcttctatagaagat
aaagaattagttaatgatttgatatctatagttactaaatatcctggagataatgacgta
tatatttatgcagagaacattaagcaaatgtataaatggaatcatataaaagtaaatata
aatgaaaatttaatagatgagcttaagcatatactacctaaaactagtataaaagtaaaa
atttaa

DBGET integrated database retrieval system