KEGG P.syringae_phaseolicola: PSPPH

Pseudomonas syringae pv. phaseolicola 1448A: PSPPH_2680

Entry

PSPPH_2680 CDS P.syringae_phaseolicola

Gene name dnaE2

Definition error-prone DNA polymerase (EC:2.7.7.7)

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway psp00230 Purine metabolism
psp00240 Pyrimidine metabolism
psp01100 Metabolic pathways
psp03030 DNA replication
psp03430 Mismatch repair
psp03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:psp00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:psp00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:psp03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:psp03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:psp03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti

Other DBs NCBI-GI: 71735001
NCBI-GeneID: 3557327
JCVI-CMR: PSPPH_2680
UniProt: Q48IB1

Position 3101078..3104173

AA seq 1031 aa
MTSEYAELHCLSNFSFQRGASSARELFERASRHGYQALAITDECTLAGIVRAWQASISTG
LPLIIGSEMHIENGPKAVLLVESQTGYEALCKLITVARRRARKGEYRLLREDFEPSSDGL
LAIWLPDIEGDAQACLAHGRWLRERFAERLWLGVELHRGADDEQRLADLLALAQSLGIPA
VASGDVHMHARGRRALQDTMTAIRHHTTVAEAGHLLFANGERHLRPLDALAEHYPDWLLA
ESVRIARRCTFDLKQLKYEYPHELVPKGQTPTSWLRELTERGARKRWPNGLTPATRAQVE
KELALITEKKFDSYFLTVHDIVEFARSQHILCQGRGSAANSAVCYALGITELNPEKSNLL
FERFISRERNEPPDIDVDFEHDRREEVIQYIFRRYGRGRAALTAVASTYHGSGAMRDVAK
VLGLPPDQINALAEAFSRWSDSLPSPERLREYGFDADTPILKRVLALTGELIGFPRHLSQ
HPGGFVISEHPLETLVPVENAAMADRTIIQWDKDDLDLVGLLKVDILALGMLSALRRTFD
LVHLHRGKRWTLADLPGDDRETYEMISRADTIGVFQIESRAQMAMLPRLRPEKFYDLVIE
VAIVRPGPIQGDMVHPYLRRRNKEEAITYPPKLKSVFERTLGVPLFQEQVMEVAIIAAGY
TPGEADELRRAMAAWKRHGGLEPHRERLRTGMLKNGYEADFADRIFEQIKGFGSYGFPES
HAASFALLTYASCWLKCHEPAAFTCALINSWPMGFYSPDQLLQDARRHHIEIRPVDVRYS
DWDCSLEPLDHPDSTRNLAIRLGLRMVRGFREDDARRIETARSKRLFSDATDLTLRAGLD
ARAAEALADSGALRGLIGHRHRARWEVAGVEAQRPLFNDLPSEDTQVTLPLPTVAEDLMA
DYATLGTTLGPHPLALLRRQLAAKRFRSSQDLLSLENDRTLSVAGLVIGRQRPGTASGVT
FVTLEDEFGMVNVVVWRDLAERQRKVLVGSQLLQVFGRLESKSGVRHLIAQRLYDLTPLL
TGLDVRSRDFQ

NT seq 3096 nt +upstreamnt +downstreamnt
atgaccagcgaatacgccgagctgcattgcctgtccaacttcagttttcagcgcggcgcc
tcaagcgcccgtgagctgttcgaacgtgcctcgcgccacggctatcaggcgctggccatc
actgacgagtgcacgctggccggtatcgtacgtgcgtggcaggcgtccatcagcaccggc
ctgccgttgatcatcggcagcgaaatgcacatcgagaacgggccgaaagccgtgctgctg
gtggaaagccagacaggttatgaggcgttgtgcaaattgatcacggtggcacgccgcaga
gccagaaaaggtgagtaccggttgttgcgtgaagattttgagccttcgtcggacggtttg
ctggccatctggctgccggacatcgaaggcgacgcgcaagcctgtctggcgcatggacgc
tggttgcgtgagcgctttgccgagcgcctctggctcggcgtggagttacatcgcggcgct
gatgacgagcagcgtctggccgacttgctggcgctggcgcaatcgttgggtatcccggca
gttgccagcggtgatgtgcacatgcacgcgcgcggtcggcgtgccctgcaggacaccatg
actgccattcgccatcacacgaccgtggccgaagcagggcacctgttgtttgccaacggc
gagcgccatttacggccactggatgcgcttgccgagcattacccggactggctgctggcc
gaatcggtgcgtattgcccggcgctgcacgtttgatctcaaacaattgaaatatgaatac
ccgcacgagctggtccccaaaggccagacacccacgtcgtggctgcgtgaactgaccgag
cgcggtgcccgcaaacgctggccgaacgggctgacgccagccacccgcgcgcaggtcgag
aaggaactggccctgatcacggaaaagaagttcgacagctactttctgaccgtgcatgac
atcgtcgagtttgcccgcagccagcacatcctttgtcagggacgcggctcggcggccaac
tcggcagtgtgttatgcgctggggatcaccgagctgaatccggaaaagagcaatctgctg
ttcgagcgcttcatctccagagagcgcaacgagccaccggacatcgacgtggatttcgag
catgaccgccgcgaagaagtcattcagtacatctttcggcgctatggccggggccgcgcc
gcgctgactgctgtcgctagcacttatcacggctccggcgcgatgcgtgacgtggccaag
gtgctgggcttgccgccagaccagatcaatgccctggccgaagccttcagccgctggagc
gattcattgccgtcgcctgaacgcttacgcgaatacggcttcgatgcggacacgccgatc
ctcaagcgcgtgctggcgctgaccggcgaactgatcggttttccccggcacctgtcgcaa
cacccgggtggcttcgtgatttccgaacacccactggagaccttggtgccggtggagaac
gccgcgatggccgaccgcacgatcattcagtgggacaaggatgatctggacctggtcggc
ctgttgaaagtcgacatacttgcactgggcatgctcagcgctttgcgccgcacgttcgat
ctggtgcatctgcaccggggcaagcgctggaccctcgcagacctgccgggcgacgaccgg
gaaacctacgaaatgatcagccgcgccgacaccatcggcgtgttccagatcgagtcgcgt
gcgcagatggccatgctgccgcgcctcagaccggaaaaattctacgacctggtcatcgaa
gtcgcgattgtccggccggggccgatccagggcgacatggttcatccgtatctgcggcgg
cgtaataaagaggaagccatcacctatccgcctaaactaaaaagcgtctttgagcgcacc
ctgggcgtgccgctgtttcaggagcaggtcatggaagtggcgatcatcgctgccggttac
acgccgggcgaggcggacgagttgcgccgcgcgatggctgcgtggaaacgccacggcggg
ctggagccgcatcgcgaacggctgcgtacgggcatgctgaaaaacggctacgaagcggat
tttgccgaccggattttcgaacagatcaagggctttggcagttatggtttccccgagtcc
cacgccgccagtttcgccttgttgacctacgccagttgctggctcaaatgccacgaaccg
gcagcgttcacctgtgcgctgatcaacagctggccgatggggttttacagcccggatcaa
ttgttacaggacgcacgtcgccaccacattgaaatccgcccggtggatgttcgctacagc
gactgggattgttcgctggagccgctcgatcatcccgacagcacgcgcaatctggcgatt
cgcctggggctgcgcatggtgcgtggttttcgcgaggatgatgcccggcgcatcgaaacg
gcccgctcgaaacggctgttcagcgatgccacagaccttaccctgcgtgccggtttggac
gctcgcgccgctgaagcactggcggattccggggccttgcgtggcctgattggtcatcgg
caccgggcgcgctgggaagtggcaggggtggaagcccagcgaccgttgttcaacgacttg
cccagcgaagacacacaggtaacgctgccgctgccgacggtggccgaagacctgatggcc
gactacgccactctgggcaccaccctcggtccgcacccactggccttgctgcgtcggcaa
ctggctgccaaacgctttcgcagctcacaagacttgctgagcctggaaaacgaccgaacc
ctcagcgtggcggggctggtcatcggccgccaacgaccgggcaccgccagtggcgtgacc
ttcgtgacgctggaagatgaattcggcatggtcaatgtcgtggtctggcgcgacctggcc
gaacgtcagcgcaaggtgctggtgggctcgcaattgctgcaggtgttcgggaggctggaa
tcaaaaagcggcgtacggcacctgatcgcccagcggctttatgacctgacgccgctgttg
accggactggatgtgcgcagccgggacttccagtaa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)

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