KEGG   Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_4753
Entry
PSPPH_4753        CDS       T00266                                 
Symbol
soxA
Name
(GenBank) sarcosine oxidase, alpha subunit
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
psp  Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp00260  Glycine, serine and threonine metabolism
psp01100  Metabolic pathways
Module
psp_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:psp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PSPPH_4753 (soxA)
Enzymes [BR:psp01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     PSPPH_4753 (soxA)
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     PSPPH_4753 (soxA)
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored FAD_binding_2 HI0933_like NAD_binding_8 DAO GIDA Pyr_redox_3 FAD_binding_3 Thi4 Pyr_redox AlaDh_PNT_C DDR1-2_DS-like Lycopene_cycl
Other DBs
NCBI-ProteinID: AAZ35988
UniProt: Q48CP0
Position
5395439..5398459
AA seq 1006 aa
MSQTQRLPNGGRINRSKVLNFTFNGQTYQGFEGDSLASALLANGVDIIGRSFKYSRPRGI
FAAGSEEPNAVLQIGATEATQIPNVRATQQALYAGLVATSTNGWPSVNTDVMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDSYDAMNQHCDVLIVGAGP
AGLAAALAAGRSGARVIVADEQEEFGGSLLDSRESLDGKPAAEWVATVVAELKSLRNVTL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGMVRQRMHRVRAKRVVLAAGTHERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLSTNNDHAYRVALDWLDASLQVVAIADARHN
PRGPLVEEARAKGIRILTGSAVIEARGSKRVTAARVAAIDVKAHTVTSPGEWLECDLVAS
SGGYSPIVHLASHLGGKPVWREDILGFVPGEAPQKRICVGGVNGVYSLADSLADGFEGGV
RAASEAGFKVVEGVMPKAFSRAEEPTLALFQVPHEKGTARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVSIPEMGTTMFRPNYTPVTF
GAIAGRHCKHIFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKNGEDLPAAVARECKA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKL
LSEVTDIDLGREAFPFMTWKEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAE
AGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVREQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGYSF
AMGVVKGGLARMGERVFAPLADGSVIEAEIVSSVFFDPKGERQNVE
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgagccagacccagcgcttgcccaacggcggccgtatcaatcgcagcaaggtgctcaac
ttcaccttcaacggccagacctatcagggctttgaaggcgactcgctggcctctgccctg
ctggccaatggcgtcgatatcatcggccgcagcttcaaatactcccgcccgcgcggcatc
tttgcagcgggttcggaagagccaaacgccgtgttgcagatcggcgcgaccgaagcgacg
caaatccccaacgtgcgcgccacgcaacaagcgctctatgcaggactggtcgccaccagc
accaacggctggccaagcgtgaacaccgacgtcatgggcattttgggcaaggtcggcggc
aagttgatgccaccgggcttctactacaaaaccttcatgtacccgcaatcgttctggatg
acttacgaaaagtacatccgcaaggctgcgggcctggggcgctcgccgaccgagaacgat
ccggacagctatgacgcgatgaaccagcactgtgacgtgctgatcgtcggcgcaggccca
gccgggctggccgccgcgctggctgccggccgcagtggtgcccgagtgatcgttgcggat
gaacaggaagagttcggcggcagtctgctcgacagccgtgaaagtctcgatggcaaaccc
gctgctgaatgggtggctacggtggtcgccgagctgaaaagcctgcgcaacgtgacactg
ctgccgcgcgccacggtcaacggctaccacgatcacaatttcctgaccattcatgagcgc
cttaccgaccacctcggtgatcgcgcgcccatcggcatggttcgccaacgtatgcaccgg
gtacgcgccaagcgtgtggtgctggctgccggtactcacgagcgcccgctggtttacggc
aacaacgatgtgccgggcaacatgctggcaggcgccgtttcgacctatgtccggcgttac
ggcgtagcaccgggtaaaaaactggtgctgtccaccaacaacgaccatgcctaccgcgtt
gcgctggactggctcgacgccagcctgcaagtggttgcgattgccgatgctcggcataac
ccgcgcggcccgctggttgaggaagcccgcgccaaaggcattcgcattctgaccggcagc
gcagtgattgaagcgcgtggcagcaaacgcgtgacagctgcccgcgtcgccgcaatcgac
gtcaaggcgcacaccgtcaccagccccggcgaatggcttgagtgcgatctggtggccagc
tccggcggctacagcccgattgtgcacttggcctcgcacttgggtggcaagccggtatgg
cgtgaggacatcctcgggtttgtaccgggcgaagcaccgcagaaacgtatctgcgtaggc
ggcgtcaacggcgtctacagtcttgcagacagcctggccgatggttttgaaggtggcgtg
cgcgcggccagcgaagcaggcttcaaggtggtcgaaggcgtgatgcccaaagccttcagt
cgcgctgaagaaccgacactggcgctgtttcaggtgccgcacgagaaaggcaccgctcgg
gcccccaagcaattcgtcgacctgcagaacgacgtgaccgctgccgccatcgagctggcg
acccgtgaaggtttcgagtcggtcgagcacgtaaaacgctacaccgcgctgggtttcggt
actgatcagggcaagctgggcaacgtcaacggtctggccatcgccgcccgttcactgaac
gtgtcgatcccggaaatgggcaccaccatgttccgccccaactacacgccggtcacgttc
ggcgcgatagccgggcgtcattgcaagcacatcttcgaaccggtgcgtttcaccgcactg
cacgcctggcatgtcaaaaacggtgccgaatttgaagacgtcggccagtggaaacgcccg
tggtacttcccgaaaaacggcgaagacctgcccgcagccgtcgctcgcgaatgcaaggct
gtgcgcgacagcgtgggtctgctggacgcttcgacgctgggcaaaatcgacattcaaggc
ccggatgcccgcgaattcctcaaccgcatctacaccaacgcgtggaccaaactggacgtg
ggcaaggcccgctacggtctgatgtgcaaggaagacggcatggtcttcgatgatggcgtg
actgcctgcctcgccgacaaccacttcctgatgactaccaccacaggcggcgctgcacgc
gtcctgcaatggctggaaatctatcagcagaccgaatggccggacctgaaagtgtatttc
acctcagtgaccgatcactgggcgacgctgacgctgtccggccccaacagccgcaagctg
ctcagcgaagtcaccgatatcgatctgggccgtgaagccttcccgttcatgacctggaag
gaaggtctggtcgccggtgtgccagctcgcgtattccgtatctcgtttaccggtgagctt
tcctacgaggtcaacattcaggctgactacgccatgggcgttctggaaaagatcgccgag
gcaggcaaacagtacaacctgacgccttacggcactgaaaccatgcacgtactgcgcgcc
gaaaagggcttcatcatcgttggccaggacaccgatggttcgatgactccggacgacctg
aacatgggctggtgtgtcggccggaccaagccattctcgtggatcggctggcgcggcatg
aatcgcgaagactgtgtacgcgaacagcgcaagcaactggtcggcctcaagcctgtcgac
ccgaccaaatggctaccagagggcgcgcaactggtgttcgatacaaaacagacgatcccg
atgagcatggttggccatgtgacttccagctatgcacacaactcgctgggctattcgttt
gcgatgggcgtggtcaaaggcggcctggcgcgcatgggagagcgggtcttcgcgcctctg
gcagacggcagcgtgatcgaagccgagatcgtttcctcggtgttcttcgatccaaagggc
gagcgccagaatgtcgagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (40)   

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