KEGG P.syringae_phaseolicola: PSPPH

Pseudomonas syringae pv. phaseolicola 1448A: PSPPH_4766

Entry

PSPPH_4766 CDS P.syringae_phaseolicola

Gene name betA

Definition choline dehydrogenase (EC:1.1.99.1)

Orthology K00108 choline dehydrogenase [EC:1.1.99.1]

Pathway psp00260 Glycine, serine and threonine metabolism

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:psp00260]

SSDB

Motif Pfam: GMC_oxred_N GMC_oxred_C DAO FAD_binding_2 Lycopene_cycl
Pyr_redox_2 ApbA Thi4 FAD_binding_3 HI0933_like
PROSITE: GMC_OXRED_1 GMC_OXRED_2

Other DBs NCBI-GI: 71735649
NCBI-GeneID: 3557996
JCVI-CMR: PSPPH_4766
UniProt: Q48CM7

Position complement(5410130..5411836)

AA seq 568 aa
MTTQSEYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQ
GRRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLEDW
SYLDCLPYFRKAETRDIGPNDYHGGEGPVSVTKPKAGNNPLFHAMVEAGVQAGFPRTDDL
NGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFEGKRAVGVA
YLVGDSDTRIQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLPGVGQNL
QDHLEMYLQYACTQPVSLYPSLKWWNQPAIGAKWMFLGTGIGASNQFEAGGFIRSSEAFE
WPNIQYHFLPVAINYNGTKGVQEHGFQAHVGSMRSPSRGRVQVKSKDPREYPSILFNYMS
SEQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDVQSDEALDQFVREHAETAYHPSC
SCKMGTDEMAVVDGQGRVHGLQSLRVVDASIMPIITTGNLNAPTIMIAEKIADKIRGRQP
LPRSTADYFVAGDKPARGKPLREISHQA

NT seq 1707 nt +upstreamnt +downstreamnt
atgacgactcaatccgaatacgactacatcatcattggtgccggctctgccggtaacacc
ctggcagcccgtctcaccgaagacgcaggcgtcactgttctgctgctggaagccggtggc
ccggactaccgtctggatttccgtacccagatgccagccgctctggcattcccgctgcag
ggccgccgttataactgggcctacgagaccgagccagagccacacatgaacaaccgccgc
atggaatgcggtcgtggtaaaggcctgggcggttcgtcgctcatcaacggcatgtgctac
atccgcggcaacgcgatggactatgacggctgggccaaagagccgggccttgaagactgg
agctacctcgattgcctgccgtacttccgcaaggccgagacgcgtgacatcggcccgaat
gactaccacggtggtgaaggtccggtcagcgtgaccaagcccaaggcgggcaacaatccg
ctgttccacgcgatggtcgaggcgggcgtgcaagccggtttcccgcgcactgacgacctc
aatggttatcagcaggaaggtttcggtccgatggaccgcaccgtgacgcctaacggtcgt
cgcgccagtaccgcccgtggttatctggacgaggccaagaagcgctcgaccctgaccatc
gtcactcacgcgctgaccgatcgcattcttttcgaaggcaagcgtgccgtcggcgtggcg
tacctggtaggtgacagcgacacccgcatccaggcccgtgcccgcaaggaagtgctgctg
tgtggcggcgcgatcgcttcgccacagattctccagcgttccggcgtcggtccggccgaa
gtgctgaacaagctggatattccggtggttcatgatctgccgggcgttggccagaacctt
caggatcacctggagatgtacctgcagtacgcctgcacccagccggtgtcgctgtaccct
tcgctgaagtggtggaaccagcctgccatcggtgcaaagtggatgttcctcggcaccggt
atcggtgcgagcaaccagtttgaagccggtggtttcattcgctccagcgaagcgttcgaa
tggccgaacattcagtaccacttcctgccggtcgcgattaactacaacggcaccaagggc
gttcaggaacacggcttccaggctcacgttggctccatgcgttcgccgagccgtggtcgt
gtgcaggtcaaatccaaagacccgcgcgagtacccgagcatcctgttcaactacatgtcc
agcgagcaggactggcaggagttccgtgacggcatccgcctgacgcgcgagatcatgcag
caaccggctctggacccgtaccgtggccgcgaaatcagccccggcatcgatgtccagtct
gatgaagcgctggatcagttcgtgcgcgagcatgctgaaacggcttatcacccgtcctgc
tcgtgcaagatgggcaccgacgagatggccgttgtcgacggtcagggccgtgtgcatggc
ctgcaaagcctgcgcgtagtcgatgcctcgatcatgccgatcatcaccaccggtaacctg
aatgcaccgacgatcatgatcgccgagaaaatcgccgacaagatccgtggtcgccagccg
ctgccacgcagcaccgccgactacttcgttgcaggcgacaagccggcacgcggcaagccg
ctgcgcgaaatcagccaccaggcctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (10)   
   PROSITE (2)   
All databases (24)

DBGET integrated database retrieval system