KEGG   Pseudohongiella spirulinae: PS2015_39
Entry
PS2015_39         CDS       T04158                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pspi  Pseudohongiella spirulinae
Pathway
pspi03030  DNA replication
pspi03410  Base excision repair
pspi03420  Nucleotide excision repair
pspi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pspi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PS2015_39
   03410 Base excision repair
    PS2015_39
   03420 Nucleotide excision repair
    PS2015_39
   03440 Homologous recombination
    PS2015_39
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pspi03032]
    PS2015_39
   03400 DNA repair and recombination proteins [BR:pspi03400]
    PS2015_39
Enzymes [BR:pspi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PS2015_39
DNA replication proteins [BR:pspi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PS2015_39
DNA repair and recombination proteins [BR:pspi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PS2015_39
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PS2015_39
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH DUF3181
Other DBs
NCBI-ProteinID: ALO44737
UniProt: A0A0S2K8S9
Position
40594..43368
AA seq 924 aa
MSADSPLILIDGSSYLFRAFHALPPLVNSKGQPTGAIKGVISMIRSLQKSHPDSPIAVVF
DAKGETFRNKVYADYKAHRPPMPDELRSQIEPIHHIITAMGLPLLVVPDVEADDVIGTLA
AQATAQQRDTLVSTGDKDLAQLVSDHVVLINTMTGERLDPPGVQKKFSLPPERIIDFLAL
TGDKVDNIPGVPGVGPKTAIKWLQEYDSVEGVIANADEIGGKIGEKLRDNIDQLRLSFEL
ATIKLDVDLDVTIKELIPESPDREQLLALFTEFEFKSWIKELEADGIEVSVEQMAAMRDN
LGIEEVEEAAQTDLSSLDLDTDQKDFTLVDSLDVLQKVAGDAKKASLLAIDVLDSGEHYM
QATIIGMALSWASGQAVYIPLAHDGLESSGALDRRRCLEFLKPLMEDPGVHKAAHDTKRL
THLLQNHDIHVDGWRFDTHLASYVLNSVASNHSLEDVSHYYLQKSLEKLDALIGSGRQKL
ALSQTSAQDAMQWLAPRVDMALRLAHQLRSQLESTGELWGLYRYYELALSPVLQRMERTG
IAVDPQRLHEQSRALSARLKELEEQVYSAAGETFNLGSPKQLQAILYDKLNLPVLKKTPK
GQPSTAEAVLQELALDYELPGMIMEHRGLSKLKSTYTEKLPLQINAGTGRIHSTFQQAVA
ATGRLSSTDPNLQNIPIRSVEGRKIRQAFVAAPGYKLLAADYSQVELRIMAHLSQDKGLV
TAFANAQDVHRATASEVFGVALDEVTAEQRRRAKAINFGLIYGMSAFGLARQLGIERHDA
QQYVDRYFERYPGVQDYMERTRELAESQGYVETLFGRRLYLPDIKAGNGMLRKAAQRTAI
NAPMQGTAADIIKQAMVDIDHWLQTGVLDARLVLQVHDELIFEVSDNDVPLLSDGVRFRM
ASAASLDVPLVVDIGVGDNWDQAH
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgtcagcggacagccccctaatcctcattgacggatcttcgtatctgttcagagccttc
cacgccctgccgccgctggttaacagcaaaggtcaaccgacaggtgccatcaagggcgtg
ataagcatgattcgcagcctgcagaaatcacaccccgatagccctatagccgttgtgttt
gatgccaagggtgaaacatttcgcaataaggtttacgccgactataaagcgcatcggcca
cccatgccggatgaactgcgcagtcagatagaacccatacaccatatcatcacggccatg
gggttgccgctgctggtggtgccagacgttgaggccgacgatgtgattggcacactggcc
gcgcaggccacggcgcagcagcgcgataccctggtgtcgacaggagataaagatcttgcg
cagttagtaagtgatcacgtcgtgctcatcaacacgatgaccggagagcgcctggacccg
ccgggggtacagaaaaaattcagcttgccgcccgagcgcatcatcgatttcctggcgctt
accggggacaaggtcgacaatattccgggtgtaccgggtgttggccccaagacggcgata
aagtggctgcaggaatatgactcagtggaaggtgtcattgccaacgccgacgagatcggc
ggcaagatcggtgaaaagctgcgcgataatattgatcagctcagactttctttcgaactg
gccaccatcaagctggatgtggacctggacgtgacgatcaaagagctgataccggaatct
cccgaccgcgagcagttgcttgccctgttcacagaatttgaattcaaatcctggatcaag
gagctggaagccgacggaattgaagtaagcgtcgaacagatggccgccatgcgtgacaat
cttggtattgaggaggttgaagaggctgcgcaaacagacctgtcgtccctggatctggat
acagatcagaaggactttacgcttgttgatagtctggatgtgctgcaaaaagtcgctggc
gatgcaaaaaaggcgtctttgctggccattgatgtcctggatagtggcgaacattatatg
caggccaccatcatcggtatggcgctgagctgggcttcgggccaggctgtatatattcct
ttggcgcatgatggtctggagtcctccggcgcgctggatcgccgccgctgtctggagttt
ctgaaacctttaatggaagatcctggcgtccacaaggcagcgcatgacaccaagcgtctg
acccacctgttacagaatcatgatattcatgttgatggctggcgtttcgatacgcatctg
gcgtcctacgtactgaattctgtggccagcaatcattcacttgaagatgtcagccactac
tatctccagaaatcgctggaaaaactggatgcactgattggcagtggccgacagaaactg
gctctcagtcagacttcggcccaggatgccatgcagtggctggcaccacgggtggacatg
gccctgcgtctggcccatcagttacgcagtcagctggagtctaccggcgaactctggggc
ctgtatcgatactacgaattggcactgagtcctgtactacagcgtatggagcgcactggc
atcgccgttgatccgcagcggctgcatgagcagtccagggcattgagtgcccgcctcaag
gagctggaggagcaggtctacagcgccgctggcgaaaccttcaatctgggttctcccaag
cagttgcaggcaattctgtatgacaagttgaacctgcctgttttgaaaaaaaccccgaaa
ggccagccatctactgccgaggcggtactgcaggagctggcgctggactacgagctgcct
ggcatgatcatggagcatcgcggtctcagcaagttgaagtctacctacacagaaaaactg
cccttgcagataaatgccggcaccgggcgtatccattccacctttcagcaggcggtcgca
gcgactggccgtctgtcatccaccgatcccaatttgcagaacatcccgatccgtagcgtt
gaagggcggaagatccgacaggcctttgttgcagcgccaggctataaactgctggctgca
gactactcgcaggttgagttgcgaatcatggcccatctatcgcaggacaagggtttggtg
accgcttttgccaatgctcaggatgtacaccgtgcgacggcgtctgaagtgtttggcgtg
gcactggatgaggtgactgcggaacagcgtcggcgagccaaggccatcaatttcggactg
atctacggaatgtcagccttcggcctggcccggcaattgggcattgaacgccatgacgcc
cagcaatacgtcgatcgctattttgaacgctaccccggtgttcaggactatatggaacgc
acgcgcgaactggcagaatcgcagggatacgtcgaaacgctgtttggacgacgcctgtat
ttgcccgatatcaaggcgggcaatggcatgttgcgcaaagccgcccagcggaccgcgatc
aacgcgcccatgcagggtacggcagccgacattatcaagcaggcaatggtcgacatagac
cattggctgcaaactggcgtgctggatgcgcgactggtactacaagtacacgatgaactg
atttttgaggtgagcgacaacgacgtgccgttactctctgacggcgtgcgattccgcatg
gcaagtgccgcttcgctggacgtgccgctggtggtggatattggcgtgggagataattgg
gaccaggctcactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (135)   
   KEGG ORTHOLOGY (1)   
   RefGene (132)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (153)   

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