KEGG T05098: PSPO

Pseudoalteromonas spongiae: PSPO_a2856

Entry

PSPO_a2856        CDS       T05098

Symbol

priA

Name

(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)

K04066

primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]

Organism

pspo Pseudoalteromonas spongiae

Pathway

pspo03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:pspo00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PSPO_a2856 (priA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pspo03400]
    PSPO_a2856 (priA)
Enzymes [BR:pspo01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSPO_a2856 (priA)
DNA repair and recombination proteins [BR:pspo03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PSPO_a2856 (priA)

SSDB

Motif

Pfam:

PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_19 YjdM_Zn_Ribbon AAA_16 AAA_30 AAA_22 GatB_Yqey zinc-ribbons_6 FtrD-like zf-CHY

Other DBs

NCBI-ProteinID:

ATC99741

UniProt:

A0A290T803

Position

I:2740636..2742810

AA seq 724 aa
MTTPVVAEIALNVPLYRNFDYLVEPQFQTNIAVGCRVAVQFGRQQLVGIVVALKSNSEFL
DKLKPISRLIDNNAIIDRHMISLIEFASHYYQNPLGECYQVALPTLLNKGEAVDKSAVPI
IKLIDENTSVNGKKQRQLIEHLVDSGSTPVTELSALGFSSATVKSLLEKAIIEKTVEYNR
DWQSKPLAIDDKPKLKREQAIALAAINQATGYTCYLLEGVTGSGKTEVYLQALEKPLQQG
KQALVLVPEIGLTPQTVNRFRRRFPNVPIMLWHSAMTDNERLSTWRAAQTQSAAIVIGTR
SSVFLPFAKLAMIIVDEEHDLSFKQQDSLRYHARDLACFRAAKLAIPLILGSATPSLETI
HNATNHKYQLLTLTERAQTQSDNQYVLLDMRGQHQQSGLALATLDYIKKELTKGKQVMVF
LNRRGFSPSLICHECGWLSQCQRCSANATYHKHIRNLICHHCGAQEHVPTQCPSCGSTQI
IPAGQGTEQVAEFLAESFPDTPITRVDRDSTRKKGSLESALHDINKGEPRILIGTQMLAK
GHHFSEVSLVVIMDVDSGLYSYDFRATEHLAQLITQVSGRAGRSGEAGTVLLQTHFPEHP
LLQDLINNGYQDFSRYALREREETLLPPYTSLAIIRCESHKLNDINNFLYDLIPEQLPSG
IQLLGPVPAALERIAGKYRYQLHIQGNERKKLHLYLHQLVSYISQSKLATKVRWSIDIDP
VSMA

NT seq 2175 nt +upstreamnt +downstreamnt
atgactacgcctgttgttgcagaaattgccttaaatgtaccgctttaccgtaactttgat
tacctcgttgaacctcagtttcaaactaatattgcggtgggttgtcgtgttgcagttcaa
tttggtcgtcagcaacttgtcggcattgttgttgcgttaaaatcaaatagtgaatttctc
gataaattaaaacctatttcacgtttaattgataacaacgcgattattgatcgccatatg
atcagccttatcgaatttgcgagtcattattaccaaaacccgcttggagagtgctaccaa
gttgcactaccaactttgttaaacaaaggcgaagcagttgataagtctgcagtgcctatc
attaaactgatcgatgaaaatacatcagtgaatggtaaaaaacagcgccaactaatcgag
catttagttgattcgggcagtacgccagttaccgaattgagtgcgctcgggtttagtagt
gcaaccgttaaatcactgctggaaaaagcgattattgagaaaacggttgaatacaatcgt
gattggcaatcaaaacctctcgcaatcgacgataaacccaaacttaagcgtgaacaagcc
attgcacttgcagcaattaatcaagctacaggctatacctgctatttgcttgaaggtgta
actggtagcggaaaaacagaagtttatctacaagctttggaaaagccattgcaacaaggt
aaacaagcgttagtactggtacccgaaattggcttaacgccacaaaccgtcaaccgcttt
cgcagacgctttcctaatgtgcctattatgctttggcactctgcaatgacggataatgaa
cgcctatcaacttggcgtgcagcacaaactcaaagcgctgccattgtaattggcacccgc
tctagtgtgtttttaccatttgccaaactcgcgatgattattgttgatgaagagcacgac
ttgtcatttaaacagcaagattcactacgctaccacgcccgtgatttagcttgctttcgc
gctgctaaactagcgattccattaatcttgggcagtgcaacaccgtcgcttgaaacgatt
cataatgccacaaatcataagtaccaactgcttacattaactgagcgagcacaaacacaa
agcgataatcagtatgtgctacttgatatgcgagggcagcatcaacagtcaggtcttgca
cttgcaacgcttgattacatcaaaaaagagcttacgaaaggtaagcaagttatggtgttt
ttaaatcgcagaggtttttcgcctagtcttatttgccacgaatgtggctggttaagtcaa
tgccaacgctgtagcgccaatgccacctatcacaaacatattcgcaatttaatttgccat
cattgcggagcgcaagagcatgtgccaacacaatgtccaagttgcggtagtacgcaaatt
atccccgcaggacaaggtacagaacaagttgctgagtttttagctgaaagctttcccgac
accccaatcacccgagttgaccgcgattcaacccgtaaaaaaggcagtttagaaagcgca
ctgcacgacataaacaaaggcgaaccgcggattttaattggcacccaaatgcttgctaaa
ggacatcattttagtgaggtgtcgctagtcgtcattatggacgtagatagcggactctac
tcttacgattttcgcgctacagagcacctagcccaattaattacccaagtttcaggtcgc
gcagggcgtagcggtgaagccggcacggtattactccaaacacattttccagaacatccg
ctattacaagacctaatcaataatggctaccaagacttctcccgttatgctttgcgtgaa
cgtgaagaaaccttgctacccccctacactagtcttgcaatcattcgttgcgaatcgcac
aagctaaacgacattaataattttttgtacgaccttattccagaacaactgccttctggt
atacaattgctcggacctgttcctgcagcacttgagcgcattgcaggcaaataccgctac
cagctccatattcaaggtaatgagcgcaaaaaattgcacttatacctacatcaacttgtt
agctacataagtcaaagtaagctagcaacaaaggtccgctggagtatcgatatcgaccca
gtttcaatggcataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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