KEGG   Punctularia strigosozonata: PUNSTDRAFT_78817
Entry
PUNSTDRAFT_78817  CDS       T03131                                 
Name
(RefSeq) ku80-like protein
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
psq  Punctularia strigosozonata
Pathway
psq03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PUNSTDRAFT_78817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psq03400]
    PUNSTDRAFT_78817
DNA repair and recombination proteins [BR:psq03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     PUNSTDRAFT_78817
SSDB
Motif
Pfam: Ku_PK_bind Ku Ku_N VWA VWA_2
Other DBs
NCBI-GeneID: 18885844
NCBI-ProteinID: XP_007378239
JGI: 78817
Position
Unknown
AA seq 864 aa
MPAERAGYTVTMFLVDISPSMGKLREVELPPGPKGERRTTEVTNLEWGLQFVKLKIQEMI
FHGRKTEQCGVILFGTEETHNLVHDQMKSGYEHVSEYIPISQPNAGTLAKLSKLQPSEVS
GDPIDALIVGLEAQAQYLGKKKTWTRKIVLLTDGESPMEIEDWEATVRKMNDIGVSLTIV
GIDFDDDDLPFHEEGKSRTKAANEQFYRSFVAELEHGIVGTCALALREITRPDIKETKSA
LTSTMLRLGDVDARPEEALELVVRTSKCTALARPKGWKRFAPVRKRRDGMDVDEDGDRDG
GEEVGEKVAWTQLAARTEYYVGNQKDEDGEDGGDHTDDESAKDGENGDGAKVEKEDLVRG
FKYGATYVPCPEGAFPRLETRKGIDICGFFKAKNFRRELAMGEVYYVWADPAVPAQQIAL
SSIAQAMEEKGVMAIARWVSRDGMDPKMGVLAPSVFEKIDCLLWVQMPFADDVRKYTFAS
LDTLINKNGEVVEEHAYLPTPEQQDAMDAFVDAMDLMEAGEKDEEGNRYPWYDTRLSYNP
AIHRTKQALFHSAVAQDLNSNPLPPPHPELLKYFEPPKKVLKRAAPAIEHAKAAFKVREV
PKRVAKGRQDGHRRARDEDEDVLLLDKFAGPNGRTQSQSQVQQTQELAETERERSQRRPK
RKAADSETESESEEEALLLDAAKPQTESKVGKPVSKRNAAHGRPPPTPPAEDGARMDVDP
GAESQADVDPGLEPGRIVGMTYPLEDFKKNIARGDVVTKAVEDLAAVIMEIVMRPFSGRR
RMEMVDCMRAMRDTCLKEDEIDAWNQFLRNLKDQCISQSPGNREFWSSVAEEGRELSLIS
DKEAKQHGGRSSVSEKEATNFMKA
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgcctgccgaaagggctgggtacacagtcacgatgttcctcgtggacatctcgccgtcc
atgggcaagcttcgcgaggtcgagcttccacccgggcccaagggcgagcgccgcacgacg
gaggttaccaacctcgagtggggactgcagtttgtcaaactcaagattcaagagatgata
ttccacggccgcaagaccgagcaatgcggcgtcatcctcttcggtaccgaagaaacgcac
aacctggtgcacgaccagatgaagagcggatacgagcacgtttcggagtatatccccatt
tcacaaccgaatgcaggaacgctcgctaaactgtctaaactacaaccaagcgaggtctcc
ggggatcctatcgacgccctcatagtgggcctcgaggcgcaggcgcagtacctcgggaag
aagaaaacctggacgcgtaaaattgtcctgctcaccgatggcgagagccctatggagatt
gaggactgggaggccacggtgcgaaagatgaacgacatcggcgtcagcctcaccatcgtt
ggtattgacttcgacgacgatgacctgcccttccacgaggaaggaaagtcacgcaccaag
gccgccaacgagcagttctaccgctctttcgtcgccgagctcgagcacggcatcgtcggt
acctgcgccctcgcgctgcgcgagatcactcgaccggacatcaaggaaaccaagtcggca
ttgacgagcacgatgctgcgcctgggagacgttgacgcgcgtccggaggaagcgctcgag
ctggtggtgcgcacgagcaagtgcacggcgctcgcgcggccgaagggctggaagcggttc
gcccccgtgcgtaaacggcgcgatgggatggatgtagacgaggatggagatcgggacggc
ggggaagaagtgggcgagaaggtggcgtggacacagctcgcggcgcgcacggagtactac
gtcgggaatcagaaggatgaggacggcgaggacggtggggaccacaccgacgacgagagt
gcgaaggacggcgagaacggggacggtgcgaaggtggagaaggaggacctcgtgcgcggg
ttcaagtacggcgcgacgtacgtgccatgccccgaaggcgcgttccccaggctggagaca
cggaagggaatcgacatctgcggcttcttcaaggccaagaactttcgacgcgaactcgcg
atgggcgaggtgtactatgtctgggcggacccggccgttcccgctcagcagatcgcactc
tcgagcatcgctcaggcgatggaagagaagggcgtcatggcgatcgctcgctgggtgagt
cgcgacggcatggaccccaagatgggtgtgctcgcaccgagcgtgtttgaaaagatcgat
tgtctgctctgggtccagatgccttttgcggatgacgtgcggaagtatacgttcgcctca
cttgatacgctgatcaacaagaacggcgaggtggtggaggagcacgcgtatctcccgacg
cccgagcagcaggacgcgatggatgccttcgtcgatgccatggacctgatggaagcgggc
gagaaagatgaagaaggtaatcgctatccatggtacgacacccgcctatcgtataacccc
gcgatccaccgcacgaagcaagcgctcttccactccgctgtcgcgcaagacctgaattcc
aatccgcttccgccgccccatcctgagttgttgaagtatttcgagccgccgaagaaggtg
ctcaagcgcgccgcgccggcgatcgagcacgccaaggccgccttcaaagttcgcgaggtt
ccgaagagggttgcgaagggccggcaagatggacaccgacgcgcgcgggatgaggacgag
gacgtgctcctccttgacaagttcgcgggcccgaacgggcgcacgcagtcgcagtcgcag
gttcagcagacgcaggaactcgcggaaacggagcgggagcggtcgcagcggcggccgaag
cgcaaggcggcggacagcgagacggagtccgagtcggaagaggaggcgctcctgctggac
gcggcgaagccgcagacggagtcgaaggtcgggaaacccgtgtcgaagcggaacgcggcg
catggacgcccgcctcctacgccgcccgcggaagacggggcgcggatggacgtcgacccc
ggcgcggagtcgcaagcggacgtcgaccctgggctcgagccgggtcgcatcgtcggcatg
acgtacccgctggaggacttcaagaagaatattgcgcgcggggacgtggtgacgaaggct
gtcgaggatctcgcggcggtgattatggagatcgtgatgcggccgttctcgggcaggagg
cggatggagatggtggattgcatgcgcgctatgagggatacgtgtttgaaggaggatgaa
atcgacgcatggaaccagttccttaggaatctcaaggaccagtgcatatcgcagtcgcca
ggaaaccgcgagttctggagtagcgtggcagaggaaggtcgagaactcagcttaatcagc
gacaaggaggcgaaacagcatggcgggcgatcgtcggtatctgaaaaggaggcaacgaat
ttcatgaaagcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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