KEGG T01976: PSTAA

Pseudomonas stutzeri DSM 4166: PSTAA_2161

Entry

PSTAA_2161 CDS T01976

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

psr Pseudomonas stutzeri DSM 4166

Pathway

psr03410	Base excision repair
psr03420	Nucleotide excision repair
psr03430	Mismatch repair
psr03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:psr03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:psr03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:psr03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:psr03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

386020767

NCBI-GeneID:

12529304

UniProt:

F2N255

Position

complement(2303087..2304592)

AA seq 501 aa
MALEDYQRMRDFAATPEPAGKARPKSRKSQALQYCIQKHDATRLHYDFRLELDGTLKSWA
IPKGPSLDPGVRRLAVHVEDHPLEYATFEGNIPEGHYGAGDVIVWDRGVWTPQGDPQEGY
RKGKLKFSLEGEKLAGSWNLVRTQMDGKKEQWFLIKSRDEAAREESEYDIVTAEPDSVLS
DRTLVPRKRGAKARVAETPPAPVKTPTKKRTPARRKAKVALEGAVPAELPEHFKPQLATL
VDTVPGGDWRYEIKFDGYRMLARIDAGEVRLFTRNGHDWTAKMPQQAAALAGLGLESGWL
DGEVVVPNEEGTPDFQALQNAFEAGRSGSILYYLFDMPYLNGMDLREVALEQRRAALREV
LERSDSELLRFSEDFTEQPDSILESACQMKLEGLIGKRAGSTYTSRRSSSWVKIKCSNRQ
EFIIVGYTQPKGTRTGFGALLLGLHDDNGELRYAGKVGTGFNHATLQSLHKKLKKLEIDK
SPLAKAPQQPMHVARSGSSRN

NT seq 1506 nt +upstreamnt +downstreamnt
atggcgctcgaagattaccaacgcatgcgtgacttcgccgccacgccggaacccgccggc
aaggcacggccgaagtcccgcaagagccaggcgctgcagtactgcatccagaagcacgac
gccacgcgtctgcattacgacttccgcctggaactggacggcaccctgaagagctgggcg
attcccaaggggccaagcctggaccctggcgtgcgccggctggccgtacacgtggaagac
cacccgctggagtacgccacctttgaagggaacatccccgaagggcattacggtgccggc
gacgtgatcgtctgggaccgtggcgtgtggacgccacagggcgacccgcaggagggctat
cgcaagggcaagctcaagttcagcctggaaggcgagaagcttgccggcagctggaacctg
gtgcgcacgcagatggacgggaagaaggagcagtggttcctcatcaaatcccgtgacgag
gcggcgcgcgaggagagcgagtacgacatcgtcaccgccgagcccgacagcgtgctcagt
gaccgcaccctggtgccgcgcaagcgcggcgcgaaggcccgcgtggccgaaaccccgcct
gcgccagtcaagacacccaccaagaagcggacaccggccaggcgaaaggcaaaggtcgcg
ctcgagggggcggttccggccgagctaccggagcatttcaaaccgcagctggccaccctg
gtcgatacggtaccggggggggactggcggtacgaaatcaagttcgacggctaccggatg
ctcgcgcgcatcgacgccggcgaggtcaggctgtttacccgcaacggccacgactggacg
gcgaagatgccccagcaggccgcggcgcttgcgggactcgggctcgagtccgggtggctg
gatggcgaggtggtggtgccgaacgaggagggcacgccggacttccaggccttgcagaac
gctttcgaggcggggcgcagcggcagcattctctattatctgttcgacatgccttacctg
aacggcatggacctgcgcgaggtagcgctggagcagcgccgcgcagcgctgcgcgaggtg
ctggagcgcagtgacagcgagctgctgcgcttctccgaggacttcaccgagcagccggac
agcattctggaaagcgcctgccagatgaaactcgaagggctgatcggcaagcgcgctggc
agcacctacacctcgcgacgcagcagcagctgggtgaagatcaaatgcagcaaccggcag
gaattcatcatcgtcggctatacccagccgaagggtacccgcaccggtttcggcgcgctg
ctgctcggcctgcacgacgacaacggcgagctgcgttacgccggcaaggtcggcaccggc
ttcaaccatgcaacgctgcagagcctgcacaagaagctgaagaagctggaaatcgataaa
agcccgctggccaaggcaccccagcagccgatgcacgtggcgcgcagtggctcaagccgg
aactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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