KEGG   Stutzerimonas stutzeri DSM 4166: PSTAA_3853
Entry
PSTAA_3853        CDS       T01976                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
psr  Stutzerimonas stutzeri DSM 4166
Pathway
psr03030  DNA replication
psr03430  Mismatch repair
psr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSTAA_3853 (holA)
   03430 Mismatch repair
    PSTAA_3853 (holA)
   03440 Homologous recombination
    PSTAA_3853 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psr03032]
    PSTAA_3853 (holA)
   03400 DNA repair and recombination proteins [BR:psr03400]
    PSTAA_3853 (holA)
Enzymes [BR:psr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSTAA_3853 (holA)
DNA replication proteins [BR:psr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PSTAA_3853 (holA)
DNA repair and recombination proteins [BR:psr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PSTAA_3853 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C DNA_pol3_gamma3 nSTAND1
Other DBs
NCBI-ProteinID: AEA85709
Position
4122066..4123097
AA seq 343 aa
MKLSPAQLGKHLQGALAPVYVVCGDEHLLCQEACDAIRAATRAQGFSERQVFHVETGFDW
GQLIEAGASLSLFAEKRLIELRIPNGKPGDKGAAALLDYLARPADDTVLLISLPKLDGST
QKTKWAKALIEGKDVQFLQIWPVDAAQLPQWIRQRLAQVGLSADQEAVELIAARVEGNLL
AAAQEIEKLKLLADAGQISADTVQAAVADSARYDVFGLIDAALQGQAAHALHMLEGLRGE
GVEAPVILWALARELRLLANISQQYGQGVPLDRAFSQARPPVWDKRRPLVSKALQRHDAA
GWSRLLMAAQRIDEQIKGQAEGDPWIGLANICLQLSGRRLGAG
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgaagctctcccccgcccaactcggcaagcacctgcaaggcgctctcgcacccgtctac
gtggtctgtggcgacgagcatctgctgtgccaggaagcctgcgatgcgattcgcgcggct
acccgtgcacaggggttcagtgagcgccaggtctttcatgtcgagaccggcttcgactgg
ggccagctcatcgaggctggcgccagcctgtcgctgttcgcggaaaaacgcctgatcgag
ttgcgcattcccaacggcaagccaggggacaagggcgccgcggcgctactggactatctg
gcgcgcccggccgacgacacggtcctgttgatcagcctgcccaagcttgatggcagtacg
cagaagaccaagtgggccaaggcgctgatcgaaggcaaggacgtgcagttcctgcagatc
tggccggtggatgccgcgcagctaccgcaatggatccgccagcgattggcccaggtcggc
ctgtccgctgaccaggaagccgtcgagctgatcgccgcgagagtcgaaggcaatctgctc
gccgccgcccaggaaatcgagaagctgaaactgctggccgacgccggccagatcagcgcc
gataccgtgcaagccgccgtcgccgacagcgcccgctacgacgtcttcggcctcatcgac
gcggcgctccaagggcaggccgctcatgcgctgcacatgctcgagggcttgcgcggcgag
ggcgtggaggcaccagtgatcctctgggcattggcgcgcgagctgcgcctgttggccaac
atctcccagcagtatggtcagggcgttccgctcgatcgcgccttcagccaggctcgccca
ccggtctgggacaaacgacgcccgttggtctccaaggcactgcaacggcacgacgccgca
ggctggagccgcttgctgatggctgcacagcgcatcgacgagcagatcaagggccaggcc
gaaggcgacccctggatcgggctggccaatatctgcctgcagctgagcggccgccggctg
ggcgcgggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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