KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102444966
Entry
102444966         CDS       T02980                                 
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X2
  KO
K13177  ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pss03041]
    102444966 (DDX1)
   03016 Transfer RNA biogenesis [BR:pss03016]
    102444966 (DDX1)
Enzymes [BR:pss01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102444966 (DDX1)
Spliceosome [BR:pss03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    102444966 (DDX1)
Transfer RNA biogenesis [BR:pss03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    102444966 (DDX1)
SSDB
Motif
Pfam: DEAD Helicase_C SPRY ResIII CMS1
Other DBs
NCBI-GeneID: 102444966
NCBI-ProteinID: XP_006137662
Position
Unknown
AA seq 740 aa
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKMGKTTIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRATKGVTKGKYYYEVSCHDQGLCRIGWSTMQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTVGCYLDVDKGQIKFSKNGKDLGLAFEIPPHIKSQALFASCVLKNAELKF
NFGEEDFKFPPKDGFIALCKAPDGNVVKSQHTGSAQVAQTKNFPNAPKALIVEPSRELAE
QTLNNIKQFKKNVDNPKLRELLIIGGVAARDQLSILENGVDIVVGTPGRLDDLVSTGKLN
LSQIRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDKQWERLGKNHVRTDEVHAKDNTRPGGN
SPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYLIQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLDRFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLG
EIEEHLNCTISQVEPDIKVPLDDFDGKVTYGQRRAAGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRMF
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggcggctttctccgagatgggggttatgccagagatagctcaagctgtggaggagatg
gactggcttcttcccacagatattcaagctgagtctatcccattgattctaggaggtggc
gatgtgcttatggctgcagaaactgggagtggaaagactggtgctttcagtatcccagtt
atccagattgtttatgaaactcttaaggaccagcaggaaggcaaaatggggaaaacaact
atcaaaactggtggggcagtgcttaacaaatggcagatgaacccatatgatagaggatca
gcttttgcaattggatcagatggtctgtgttgccaaagcagagagataaaggaatggcat
ggatgcagagcaactaaaggagtgactaaaggaaaatattactatgaagtatcctgtcat
gaccagggcttgtgcagaattgggtggtccactatgcaggcttcactggatttgggcact
gacaaatttggctttggctatggtggaactggaaagaagtcacataacaaacagtttgat
agttatggtgaggaattcactatgcatgatacagttggatgctatctagatgtagacaaa
ggacaaattaagttctctaaaaatgggaaagaccttggccttgcatttgaaatcccacca
catataaaaagccaagcactttttgcatcctgtgttctgaagaatgctgaattgaagttc
aactttggcgaagaagactttaaatttccaccaaaagatggctttattgctctttgcaaa
gcaccagatggcaatgttgtgaaatcgcagcacacgggaagtgcacaagtggctcaaaca
aagaactttcctaatgctccaaaagcattaattgtggaaccgtccagagagttagcagaa
caaactttgaacaacataaaacagttcaaaaaaaatgttgataatcctaaattaagagag
ctcctgattattggtggtgttgctgcaagagatcagctttctattctggaaaacggtgtg
gacattgttgtaggaacccctggaagattggatgacttggtgtcaactggaaagcttaac
ttatctcaaattagattcctggttcttgatgaagctgatggcctccttctccagggttat
tcagatttcataaacagaatccacagtcagattcctcagataacttcagatggaaaaaga
ctgcaggttattgtgtgttctgcaactttacattcttttgatgtgaagaaactgtcagag
aagatcatgcatttccccacctgggttgacttaaaaggagaggattctgtcccagaaact
gtccaccatgttgttgttcctgtgaatcccaaaactgacaaacagtgggaaaggcttgga
aagaatcatgtccggactgatgaggtacacgcaaaagataatacaaggcctggtggtaac
agtccagaaatgtggtctgaagctattaaaatactgaagggagagtatactgttcgagca
attaaggaacacaagatggatcaagcaattattttctgcagaactaaaatagactgtgat
aacatggagcagtacttaatacaacagggaggaggtccagataggaaaggacatcagttt
tcgtgtgtctgtctgcatggtgacagaaaacctcatgaaagaaaacaaaacttggacaga
tttaagaaaggagatgtccgattcttgatctgcaccgatgtagctgctagaggaattgat
atccatggtgttccttatgttatcaatgtcacgcttcctgatgaaaagcaaaactatgtt
catcgaattgggagagtaggcagagctgaaagaatgggtctggcgatttccctcgtggca
acagaaaaagagaaggtgtggtatcatgtttgtagtaaccgtgggaagggttgctataat
actaggctgaaggaagatggaggttgcaccatatggtacaatgagatgcagttgctggga
gagattgaagaacatctgaattgtactatttcccaagttgagccagatataaaagtaccg
ttagatgactttgatgggaaggttacatatggacaaagaagggctgcaggcggtggaacc
tataaaggccatgtggatattttggcacctacagtacaagagttggccgcccttgaaaag
gaggctcagacatctttcttacatcttggctaccttcctaaccagctgttcagaatgttt
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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