KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102447999
Entry
102447999         CDS       T02980                                 
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X3
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pss04121]
    102447999 (PDZRN4)
Enzymes [BR:pss01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102447999 (PDZRN4)
Ubiquitin system [BR:pss04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    102447999 (PDZRN4)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 Tricorn_PDZ
Other DBs
NCBI-GeneID: 102447999
NCBI-ProteinID: XP_006121032
Ensembl: ENSPSIG00000003345
UniProt: K7F652
Position
Unknown
AA seq 777 aa
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPINK
THGSSQDVQLMDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFY
EGNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPNS
IAARDGRIREGDRILQINGQDVQNREEAVALLSSDECKKIVLLVARPEMQLEEGWLDDER
NEFLEELNLEMLEEQHNEAMQFTANEMEQPKKHEEEDGTTDTATSSSNNQEKDSGVGPTD
ESLRNDESSEQENAPDEQNKATLQSTRELRQSQDTLGSIELQCNESLVSGEYIESDFIGN
QDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNRSQQDGVEHELQLLNEELRNIELE
CQNIMQAHRLQKVKDEYGDIWALHDGGFRNYNTSIDVQRGKLDDIIEHPEKSDKDSSSAY
NTAESCRSTPLTIEQSPDSSLQRMISITNRKNLRSTIVANQMCSGQSGREATSSKTKASE
QNSTVEEKETVSESSKFTEQEKQSTEHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQ
RSAVEYAQSQLSLVSMCKDSQKCTEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIK
EERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGS
EGKKEINILELSHKKMMKKRNKKILDSWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgggctgcaatctctgcacttttcagaaaagagaggaacactacaaactgctctatgaa
gtttcacaggtcaatgggaaggatctctcgaaggccactcacgaagaagcagtggaagct
tttcggaatgccaaagagccgattgtagttcaggttttacggagagcacccattaataaa
acacatgggagctcacaggatgttcagcttatggatgctagcactcagaccgacatcacc
tttgagcacattatggctctggccaagcttaggccatccacacctccagtgccagatatc
tgtccctttctgctttccgacagctgccattctcttcacccagtggagcatgaattttat
gaaggtaatgagtatctttccagcctgcctgctgatgcagatagaacagaggactttgag
tatgaggaggtggagctgtgtcgtgttagcagtcaagagaagctggggctgactgtctgc
tacagaacagatgatgaggaagacacgggaatctatgtcagtgaggttgatccaaacagc
attgctgccagagatggacggatccgagaaggggaccgcattttgcaaataaatggccaa
gatgtccagaatcgggaggaggcagtggctttgctctccagtgatgaatgcaagaaaatt
gtgttgctggttgcaagaccagagatgcagctggaggagggatggctggatgatgaaagg
aatgaattcttagaggagttaaacttagaaatgttggaagaacagcataatgaagcaatg
cagttcacagccaacgagatggagcagccaaaaaagcacgaggaggaggatggcacaacg
gacactgcaacctcctcatccaataaccaggagaaggacagtggagtagggcctacagat
gagagtttgcgtaatgacgaaagctctgagcaggaaaatgcacctgatgagcagaacaaa
gcaaccctgcagagcacccgggagctgagacagagccaggacaccttaggaagcattgaa
ctccagtgcaatgaaagccttgtgtcaggggaatacattgaatctgatttcattgggaac
caagacgaggagtgtgaaaggtttcggcagctgctggagctgaagtgcaagattcgaaac
catggagagtatgacctgtattattcgagcagcacaatagaatgtaacagaagtcagcaa
gatggggtggagcatgagctacagttactcaatgaagagctgagaaatattgagcttgag
tgtcagaacataatgcaggctcacaggcttcaaaaggtgaaggatgagtatggagacatt
tgggcattacatgatggaggattcaggaattataacaccagcatagatgtacaaagaggt
aaattggatgacatcatagagcacccagagaaatctgacaaagacagctccagtgcatac
aacacagcagaaagctgccggagcactccactgactattgagcagtctccagatagctcg
ctccagagaatgatcagtatcaccaacagaaaaaacctgagaagcacaattgtagctaac
cagatgtgttctggacagagtggtagggaagcaacctcatccaaaaccaaagcctctgag
caaaacagtactgtcgaagaaaaggaaactgtttcagaaagtagcaaattcacagagcag
gagaagcaaagcactgagcacattccttacctatcaccatatcatagctcttcatacagg
tatgggaatatacctgcccatgcaaagcattatcaaagctacatgcagctgatccagcaa
agatccgcagtcgagtatgcccaaagtcagctcagtctagtgagcatgtgcaaagattca
cagaagtgtacagagcccaaaatggaatggaaagtgaaaataaggagtgacggaacaagg
tatatcaccaagagaccagtgcgagacagaatcctgaaggaacgtgccttaaagattaaa
gaggagcgcagtgggatgacgactgatgatgatacgatgagtgaaatgaagatgggtcgt
tactggagcaaagaggagcggaagcagcacttagtgcgagccaaggagcagaggcggcgg
cgggagttcatgatgcggagcaggttagagtgtcttaaggaaagtccacagagtggcagt
gaaggcaaaaaagaaattaacattcttgaacttagtcacaaaaagatgatgaaaaaaaga
aacaagaaaatcttggacagctggatgacaatccaagaactgatgacacatggtgctaag
tctccagacgggacaagagtgcacaatgcctttttatcagttactactgtatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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