KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102456463
Entry
102456463         CDS       T02980                                 
Symbol
SOX5
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-5
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pss03000]
    102456463 (SOX5)
Transcription factors [BR:pss03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    102456463 (SOX5)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 102456463
NCBI-ProteinID: XP_014428106
Ensembl: ENSPSIG00000002789
Position
Unknown
AA seq 783 aa
MEFGAEETLVLLPGRFAALCGKQELTVRPTEMSSKRPASPYGEADGEVAMVTSRQKVEEE
ESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQESCGHRTPTSQHNTMEIDGNKVMSSFA
PHNSSTSPLKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEET
PSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDE
QKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPV
FPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLY
AAQLAAMQVSPGGKIPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPK
TSEGKSPTSPTSPHMPTLRINSGASSLKSSVPATLASPSARVNTIDILSSITSSGYLNDH
DAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKDKTTLESLTQQLAVKQN
EDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRK
ILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTC
LVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAXPPLPSEHSSVSS
SPEPGMPVIQSTYGIKGEEPHIKEEIQANDINGEIYDEYDEEEDDPDVDYGSDSENHIAG
QAN
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggagtttggagctgaggaaactttggttttgttgccaggacggttcgcagcactttgt
ggcaagcaagagctaacagtgcgaccgacagagatgtcttccaagcgaccagcctctccg
tatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaagaagag
gagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaacaagcct
cactctgaggaatttcagccagtttctctgttgacgcaagagagttgtggccataggact
cccacttctcagcacaacacaatggaaattgatggcaataaagtgatgtcttcatttgcc
ccgcacaactcatctacctcacccttgaaggcagaagaaggtgggcgtcagagtggagag
tcattgtccagcacagccctgggaactcctgaaaggcgtaaaggcagcctagcagatgtt
gtagacaccttaaagcaaagaaaaatggaagagctcataaaaaatgagcctgaagaaact
cccagtattgaaaagctactatcaaaggactggaaagacaagcttcttgccatgggatca
gggaactttggagaaataaaagggactccagaaagcctagctgagaaggaaaggcagctc
atgggcatgatcaatcagctgaccagtttgcgggagcagctgctagcagctcatgatgaa
cagaagaaactggctgcatcacaaattgagaaacaacgccagcaaatggagctggctaag
cagcaacaggaacagattgcaagacaacagcagcagctcctgcagcagcaacacaaaatt
aaccttcttcagcaacagatccaggtacaaggtcagctgcctccattgatgattccagtg
ttccctccagaccaacgaaccctagcagcagctgctcagcaaggattcctccttcctcct
ggtttcagctacaaggcaggatgcagtgacccttaccctgttcagctgatcccaactacc
atggcagctgctgccgcagcaacaccaggcttaggcccactccaactgcagcagttgtat
gctgcccagcttgctgcaatgcaagtatctccaggtggcaagatacctggcataccccaa
ggcaaccttggtgctgctgtatcccctaccagcatccacacagacaagagcacaaacagt
cctccacccaaaagcaaggatgaagtggcccagccactgaacctctcagctaaacccaag
acatctgagggaaaatctccaacatcacccacctctcctcatatgccaactctgagaata
aacagtggggccagttcactcaaatcctctgtgccggcaacattagctagtccttcagcc
agagttaacacaatagatattctttcttctatcacgtcgtcaggttatttaaatgaccac
gatgctgttaccaaggcaatccaggaggcccgccagatgaaggagcaacttcggagggaa
caacaggtgcttgatgggaaggtggctgttgtgaatagtctgggtctcaataactgcagg
acagaaaaggacaaaacaacactggagagcctgactcaacagctggcagtaaaacagaat
gaagatgggaagtttagccatgctatgatggatttcaacatgagtggtgattctgatgga
agtgcaggtgtgtcagaatctagaatttatcgggaatccagagggcgtggaagtaatgaa
ccccatatcaagcgtccaatgaatgccttcatggtgtgggctaaagatgagcgaaggaag
atccttcaagccttccctgacatgcacaactccaacattagcaagatactgggatctcgc
tggaaagctatgacaaacctagagaagcagccatactacgaggagcaggcccgactcagc
aagcaacatctggagaaatacccagactataaatacaagcccaggccgaagcgcacctgt
cttgtggatggcaaaaaactgcggatcggcgaatacaaagcaatcatgcgcaacaggcga
caagagatgaggcaatattttaatgttgggcaacaagcacagattcctatcgctaccgcc
ggtgtagtctacccaggagccnnccctcctctgccatcagagcactcgagtgtgtccagc
agcccagagcccggcatgccagtcatccagagcacttacggcatcaaaggtgaggagcct
catatcaaagaggagatacaggccaatgacatcaatggagaaatctacgatgagtacgac
gaggaagaggatgaccctgatgtggactatggcagtgacagtgaaaatcacattgcaggg
caagccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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