KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102458390
Entry
102458390         CDS       T02980                                 
Symbol
DDX39A
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX39A
  KO
K13182  ATP-dependent RNA helicase DDX39 [EC:5.6.2.7]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pss03041]
    102458390 (DDX39A)
Enzymes [BR:pss01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102458390 (DDX39A)
Spliceosome [BR:pss03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    102458390 (DDX39A)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-GeneID: 102458390
NCBI-ProteinID: XP_025044955
Position
Unknown
AA seq 427 aa
MAEQDVENELLDYEEDEEPQVVADAVPPAAKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQXPRLSPQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALVR
NKSLNLRSVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEGDAKILNEVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcggagcaggatgtggagaacgagctgctggattatgaggaggacgaggagccccag
gtggtggcggacgcggtgccccctgcagcaaagaaggacgtgaagggctcctatgtgtcc
atccacagctcagggttccgggacttcctgctcaaacccgagctcctgcgagccattgtg
gactgtggcttcgagcacccgtctgaagtgcagcacgagtgcatcccgcaggccatcctg
ggcatggacgtgctgtgccaggccaagtcgggcatgggcaagacggctgtcttcgtgctg
gccacgctgcagcagtgaccccgtctctccccccaggtgtccgtgctggtgatgtgccac
acgcgggagctggcgttccagatcagcaaggagtacgagcgcttctccaagtacatgccc
agcgtcaaggtggcggtgttcttcgggggcctctccatcaagaaggacgaggaggtgcta
aagaagaactgcccccacatcgtggtggggaccccgggccgcatcctggccttggtgcgc
aacaagagcctcaacctgcgcagcgtcaagcactttgtgctggacgagtgcgacaagatg
ctggagcagcttgacatgcggcgggacgtgcaggagatcttccggctcacgccccacgag
aagcagtgcatgatgttcagcgccaccctcagcaaggagatccggcccgtctgcaggaag
ttcatgcaggaccccatggaggtgttcgtggacgacgagaccaagctgacgctgcacggc
ctgcagcagtactacgtgaagctgaaggacagcgagaagaatcgcaagctcttcgacctg
ctggacgtgctggaattcaaccaggtggtgatcttcgtcaagtcggtgcagcgctgcatg
gcgctggcccagctgctggtggagcagaacttcccggccatcgccatccaccggggcatg
gcgcaggaggagaggctgtcccggtaccagcagttcaaggatttccagcgccgcatcctg
gtggccaccaacctgtttgggcgggggatggacatcgagcgcgtcaacatcgtcttcaac
tacgacatgcccgaggactcggatacctacctgcaccgggtggcacgtgctgggcgcttt
ggcacgaagggcctggctgtcacctttgtgtcggacgagggagacgccaagatcctcaac
gaggtgcaggatcgttttgaggtgaacgtggccgagctgcccgaggagatcgacatttcc
acgtacattgaacagagccgataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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