KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102458937
Entry
102458937         CDS       T02980                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pss03036]
    102458937 (KDM4B)
Enzymes [BR:pss01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     102458937 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     102458937 (KDM4B)
Chromosome and associated proteins [BR:pss03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102458937 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C
Other DBs
NCBI-GeneID: 102458937
NCBI-ProteinID: XP_006110575
Ensembl: ENSPSIG00000017498
UniProt: K7GHK9
Position
Unknown
AA seq 1122 aa
MGSENPSPQNPGCKIMTFRPTLEEFRDFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYNLWKQGKDSAILDHMKPTALTSPELDAWNE
TKAELKAKLLRRMGDEEEDSKQSYRSHRKRSQPRRHKTEDQKSLGEVIAMETALEEVKMK
EELKRGPDLDEEERSKVTEGGEGDTKVKGRPPKVKGERKKKHSHHQHHHHHSHHLQPPQP
PLQPQQQPPPPPQPQQPPAEEEAPAARPLIPVAAPASATAEKSLPSVPLNVVQPSEVPSE
EEDFKPRPIIPMLYVVPRTKKVVFEKERMSCQQAFEQFATQKGQVWREQTVPLELTVKEE
ESGEAENADVATEVNDLQATSAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEET
FPFSGEEDVSDPEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTLFYPYTQSL
QMEKEAVQVSIGESSSLLQLSKCGQKTKPLIPEMCFTSGGENTEPLPSNSYIGEDGTSLL
ISCAKCCLQVHASCYGIRPDLVNEGWSCSRCSASAWAADCCLCNLRGGALQMTTDGRWIH
IICAIAVPEARFLNVIERHPVDISSIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTS
FHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANHNVQFRREVSLGQTVITKNRNGLYYRC
KVIGMTTQTFYEVNFDDGSYSDNVYPESITSRDCIQMGPPPEGELVQLQWTDGIIYKAKF
IAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEGGFSGDEVKA
AKRPRVGNSRNPEDYGQNPDYLAFMETLLQTQYQPGPQSNMF
NT seq 3369 nt   +upstreamnt  +downstreamnt
atggggtctgaaaacccaagtccacagaaccctggctgtaagatcatgaccttccgtccc
accctagaggagtttcgggactttgggaaatatgttgcctacattgaatcgcagggagca
catagggcagggcttgccaaggtgattcctcccaaggaatggaagccccgaaaaacttat
gacgacattgatgacatggtcatcccagcacctatccagcaggtggtgactggacagtcg
gggttgttcacccagtataatatacagaagaaacccatgacggtgggagaataccggcgt
ctcgccaacagtgagaagtactgtactccgcgccaccaagattttgaagacctggaacgc
aaatactggaagaatctgacgttcgtctcaccaatttatggggcagatatcagtggctca
ctatatgatgcagatgtagaagaatggaatatagggaatctgaacaccctgttggacatg
gtggagcatgagtgtgggattatcatagaaggtgtgaacactccctatctttattttggc
atgtggaaaacaacatttgcatggcatactgaggacatggatctctacagcatcaactac
ctgcattttggggagccgaaatcctggtatgccataccaccagagcatggcaagcgattg
gaacgcctggcaaaaggatttttcccaggaagctctcagggatgtgatgccttcctccgc
cacaagatgaccctaatttctccctccatcttgaagaaatatggcatcccatttgaccgg
atcacccaagaggctggagagtttatgatcacgtttccttatggctatcatgctggattc
aatcatggcttcaactgtgctgagtccaccaactttgccacactgcggtggattgactat
ggcaagatggctacgcaatgcacctgccgcaaagacatggtgaagatttccatggatgtt
tttgtaagggttctacaaccagaacgttataacttatggaaacaagggaaagatagtgct
attctggaccacatgaaacccacagctctgaccagcccagagctggatgcctggaatgag
acaaaggctgagctgaaagctaagctgctccgcaggatgggagatgaagaagaggacagc
aaacaaagctaccggtctcacagaaaaagaagtcaacctagaaggcataaaacagaagat
cagaagtctcttggggaagtcatagctatggagactgccctggaagaagtcaaaatgaag
gaggagttgaaaagagggccagacctagatgaagaggagagaagcaaagtgactgagggg
ggagaaggagacaccaaggtaaaaggccgtcctccaaaagtaaaaggtgagagaaagaag
aagcactctcatcatcagcatcaccaccatcacagtcaccacctgcagccacctcagcct
cctctgcagccacagcagcagccgccaccacctccacagccgcagcagccacctgcagag
gaagaggcaccagcagcaaggccactgattcccgtagcagcaccagcatcagccacagca
gagaagagcttaccctctgttcccctcaacgtcgtccagccatcagaggtgccaagcgag
gaggaagactttaagccccgacccattattcccatgctttatgtggttccacggaccaaa
aaggtggtatttgaaaaggagcgcatgtcctgccagcaggcctttgagcagtttgccaca
caaaaaggccaggtttggcgggagcagacggtccctttggagctcacagtgaaggaggag
gagagcggagaagcagaaaatgcagatgttgccactgaggtcaatgacttacaggccact
tctgctttttcaaaaatgaagatggagataaagaaaagtcgccgtcatccactgggcaaa
ccaccgacccgatccccattatctgtggttaaacaggagacctcaagtgatgaagaaacg
tttccattttctggggaggaggatgtgagtgacccagaggctttgaagtctttactttcc
ctgcagtggaagaataaagcacataacttcccggctgagcgcaaattcaatgcagctgct
gccctaagtgagccctactgtgctgtctgtaccctcttctacccttatacccagtcctta
cagatggagaaagaggctgtccaggtctccataggagagagctcctccttgctccagctt
tccaagtgtggacagaagacaaagcccctgatccctgagatgtgttttacctcaggtggt
gaaaacacagaaccccttccttccaactcgtacattggagaagatggaaccagcctcctg
atatcctgcgccaagtgctgcctgcaggttcatgctagttgctatggaatacgccctgat
ctagtgaatgaaggctggtcttgttcacggtgctcagccagtgcgtgggcagcggactgc
tgcctttgtaatctcaggggaggagctcttcagatgaccactgatggaaggtggattcat
ataatctgtgctattgctgtcccagaagcccgcttcctcaatgtaatagagcgccatcct
gtggacatcagttctattccagagcaaaggtggaaactgaaatgtgtgtactgccggaag
cggatgaagaaggtttccggtgcctgcattcaatgctcctatgagcactgctccacttcc
ttccatgtgacctgtgcacatgccgcaggggtacccatggagccagatgattggccatat
gttgtgtccatcacttgcttcaaacataaagcagccaaccacaatgtccagtttcggagg
gaagtatcactggggcagactgtgattacaaagaaccgcaatggactctactacaggtgt
aaagtgattggcatgacaacacaaactttctatgaagtgaactttgatgatggctcttac
agcgacaatgtgtacccggaaagcattactagcagagactgcattcagatgggaccccct
ccagaaggcgagttggttcagctgcagtggactgatggaatcatctacaaggccaagttt
attgcagctcagatcagtcagatttatcaggtggagtttgaagatggctctcagttgatg
gtaaaacgtggtgatatttacacgttggaggaagagcttcctaagagagtgaaatctcgc
ctgtccctcagcactggggcccctcaggaaggtggattttcgggagacgaagtgaaggcg
gccaagcgtccccgagtggggaattccaggaatcctgaggactatggacagaacccagat
tacttggccttcatggagaccctgctgcagacgcagtaccaaccaggaccacagagcaac
atgttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (56)   

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