KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_0360
Entry
PSPTO_0360        CDS       T00118                                 
Symbol
thiI
Name
(GenBank) thiamin biosynthesis protein ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst00730  Thiamine metabolism
pst01100  Metabolic pathways
pst01240  Biosynthesis of cofactors
pst04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:pst00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    PSPTO_0360 (thiI)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    PSPTO_0360 (thiI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pst03016]
    PSPTO_0360 (thiI)
Enzymes [BR:pst01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     PSPTO_0360 (thiI)
Transfer RNA biogenesis [BR:pst03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    PSPTO_0360 (thiI)
SSDB
Motif
Pfam: ThiI THUMP QueC Rhodanese tRNA_Me_trans
Other DBs
NCBI-ProteinID: AAO53904
UniProt: Q88AM9
Position
392832..394286
AA seq 484 aa
MKLIVKVFPEITIKSPPVRKKFIRQLGKNIRTVLRELDADIVVGGVWDNLEVETRLTDPK
VLQGIRDRLSCMPGIANFLQVAEYPLGDMDDVVAKCKLHYADLLPGTMFSVRCKRAGRHD
FSSMDVEKYVGSQLRMQCGAAGIELKKPDLVVRMEIRDQRLFVVHDQHKGMGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEIDVLVTGEAISQVASQTL
PNLSLIDAATDKLVLRPLVATHKQDIVDLATEIGTADFARHMPEYCGVISVNPKTNAKRN
RVEYEEQQFDMAILEQALERAKLVSIDRVIDDLSRNIDIEEVSQALAGQVIIDIRHPDAQ
EDQPLQVPGVEIQTLPFYALNSRFKALDDTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgaaactaatcgttaaagttttcccagaaatcaccatcaaaagcccgccggtgcgcaag
aaattcatccggcagctgggcaagaacattcgtaccgtgctccgtgaactggacgcggac
attgtcgtgggtggcgtatgggacaaccttgaggtcgaaacccgtctgaccgaccccaaa
gtgctgcagggcataagggaccggcttagctgcatgccggggattgccaactttctgcag
gtggccgagtacccgctgggcgacatggatgacgtggtcgccaagtgcaaactgcactac
gccgatctgttgccgggcacgatgttttcagtgcgctgcaaacgcgccggtcgtcacgat
ttcagctcgatggacgtcgaaaaatacgtcggcagccagttgcgcatgcaatgcggcgcg
gccgggatcgagctgaaaaagcccgatctggtcgtgcggatggaaattcgcgaccaacgg
ttgtttgttgttcatgaccagcacaagggcatgggcggctatcctttgggcgcgctggag
cagaccctggtattgatgtccggcgggttcgattcgaccgttgcggcctaccagatcatg
cgccgcggccttatggcgcacttctgcttcttcaatctgggcggtcgtgcccatgaactg
ggcgtgatggaagtcgcgcatttcatctggaagaagtacggcagttcgcagcgtgtgctg
tttgtcagcgtgcctttcgaggaagttctcggagaaattctgcagaaagtcgataacagt
catatgggtgtagttttgaagcgtatgatgttacgcgctgcatccgctgtggctgatcgt
ctcgaaatcgacgtgctggtgacgggcgaagcgatttcacaggttgccagccagacactg
ccgaacctgtcgctgatcgacgcggccaccgacaaactggtgttgcgaccgctggttgca
acccacaagcaggacatcgtggacctggcgactgaaatcggcactgccgattttgcccgg
cacatgcccgagtattgcggggtgatttcggtcaacccgaagaccaacgccaagcgaaat
cgcgttgagtacgaagaacaacagttcgacatggcgattctcgagcaggcgctcgagcgc
gccaagctggtttcgatcgatcgggtcatcgacgatctgagccgcaatatcgacatcgaa
gaagtcagccaggcgctggccggccaggtcatcatcgacatccgtcacccggatgcccag
gaagaccagccgctgcaagtgcccggcgtggagatacagacgttgccgttctacgcactg
aacagccgtttcaaggcactggatgacacgcgccagtaccttttgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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