KEGG T00118: PSPTO

Pseudomonas syringae pv. tomato DC3000: PSPTO_1540

Entry

PSPTO_1540 CDS T00118

Gene name

dxr

Definition

1-deoxy-D-xylulose 5-phosphate reductoisomerase

Orthology

K00099

1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]

Organism

pst Pseudomonas syringae pv. tomato DC3000

Pathway

pst00900	Terpenoid backbone biosynthesis
pst01100	Metabolic pathways
pst01110	Biosynthesis of secondary metabolites

Class

Metabolism; Metabolism of terpenoids and polyketides; Terpenoid backbone biosynthesis [PATH:pst00900]

SSDB

Motif

Pfam:

DXPR_C DXP_reductoisom DXP_redisom_C GFO_IDH_MocA KRAP_IP3R_bind

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

1698441..1699631

AA seq 396 aa
MSGPQHITILGATGSIGLSTLDVVARHPTLYQVFALTGFSRLDELLALCIKHTPQYAVVP
EQVAARKLQDDLAAAGLDTRVLVGEGGLCEVAAHPMVDAVMAAIVGAAGLRPTLAAVEAG
KKVLLANKEALVMSGALFMQAVRQSGAVLLPIDSEHNAIFQCLPGDFARGLGAVGVRRIM
LTASGGPFRETPLEQLQDVTPEQACAHPVWSMGRKISVDSATMMNKGLELIEACWLFDAR
PDQVEVVIHPQSVIHSLVDYVDGSVLAQLGNPDMRTPIANALAWPARVDSGVAPLDLFRI
GQLDFQEPDEERFPCLRLARQAAEAGGSAPAMLNAANEVAVAAFLDGRIRYLEIAGIIEE
VLNREPVTAVVGLDAVFAADAKARLLAGQWLERNER

NT seq 1191 nt +upstreamnt +downstreamnt
gtgagtgggccgcaacacattaccattctgggtgcaaccggctcgattggtctgagcacg
ctggatgtcgttgcacgtcatccgacgctttatcaggtgtttgcgctcaccggcttcagt
cgtctggacgagttgctggccctgtgcatcaagcacacgccgcaatacgcggtagtgccc
gagcaggttgccgctcgaaaactgcaggatgacctggcggcggccgggctcgatacccga
gtgctggtgggcgagggcggtctgtgcgaagtggcggcgcatcctatggtcgatgcggtt
atggcggccatcgtcggcgcggctggcttgcgtccgacactggctgcggtcgaggcgggc
aagaaggtgttgctggccaacaaggaagcgctggtcatgtccggcgccctgttcatgcag
gctgtgcgccagagcggtgcggtgctgctgcctatcgacagcgaacacaatgcgattttc
cagtgcctgcccggcgattttgctcgcggtctgggcgctgtcggtgtgcggcgcatcatg
ttgactgcctcaggcgggccgtttcgcgaaacaccgctggagcagttgcaggatgtaacc
ccggaacaggcctgtgctcatccggtctggtcaatggggcgcaagatttcggtcgattcg
gcgaccatgatgaacaaggggctggagctgattgaagcctgctggctgttcgacgcacgc
cctgatcaggtagaggtggtgattcaccctcaaagcgtgatccactcgctggtcgattac
gttgatggctcggtactggcccagttgggtaatcccgacatgcgtacgcctattgccaat
gcactggcatggcctgcacgtgtagactctggcgtcgcgccactggatctgtttcgcatt
ggtcagctggatttccaagagcccgacgaggagcgttttccttgcctgaggctggcgcgt
caggctgccgaagctggcggcagtgcgcccgccatgctcaatgccgccaatgaagtggct
gtggcggcatttctcgatgggcgtatccgttacctggaaatcgccggtatcatcgaggag
gttctgaatcgtgagcctgtgactgcggtcgtagggctcgatgcggtatttgcagcggat
gcgaaggcgcgtttgctggcaggccaatggctcgaaagaaacgagcgataa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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