KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_1891Help
Entry
PSPTO_1891        CDS       T00118                                 

Gene name
pcD
Definition
piperideine-6-carboxylate dehydrogenase
Orthology
K00128  
aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
Glycolysis / Gluconeogenesis
Pentose and glucuronate interconversions
Ascorbate and aldarate metabolism
Fatty acid metabolism
Valine, leucine and isoleucine degradation
Lysine degradation
Arginine and proline metabolism
Histidine metabolism
Tryptophan metabolism
beta-Alanine metabolism
Glycerolipid metabolism
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Propanoate metabolism
Limonene and pinene degradation
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Class
Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:pst00010]
Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:pst00040]
Metabolism; Carbohydrate metabolism; Ascorbate and aldarate metabolism [PATH:pst00053]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:pst00620]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:pst00640]
Metabolism; Lipid metabolism; Fatty acid metabolism [PATH:pst00071]
Metabolism; Lipid metabolism; Glycerolipid metabolism [PATH:pst00561]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:pst00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pst00310]
Metabolism; Amino acid metabolism; Arginine and proline metabolism [PATH:pst00330]
Metabolism; Amino acid metabolism; Histidine metabolism [PATH:pst00340]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pst00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:pst00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:pst00903]
Metabolism; Xenobiotics biodegradation and metabolism; Chloroalkane and chloroalkene degradation [PATH:pst00625]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JCVI-CMR: 
UniProt: 
Position
2066812..2068302
Genome map
AA seq 496 aa AA seqDB search
MVAELLARLGVANSAHTQGDYPVYTPIDGSQIASVTLENEAQVVARIDSAHSAFLKWRTV
PAPRRGELVRIFGEVLREHKADLGELVSVEAGKITQEGLGEVQEMIDICDFAVGLSRQLY
GLTIASERPGHHMRETWHPLGVVGVISAFNFPVAVWAWNTTLALVCGNPVIWKPSEKTPL
TALACQALFDKALTIFGDAPAALAQLVIGDRDAGEALVDDPRVPLISATGSTRMGREVGP
RVAARFGRTILELGGNNAMILAPSADLDLAVRGILFSAVGTAGQRCTTLRRLIVHRSIKD
EVVACVKAAYAKVRVGDPREGNLIGPLIDQQAFSAMQNALTKARDEGGQVFGGERQLQDK
YPNGYYVTPAIAEMPGQTEVVRHETFAPILYVLAYDDFEEALRLNNEVPQGLSSCIFTTD
LREAEAFQSAAGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDSWRAYMRRQTNT
VNYSRELPLAQGIVFD
NT seq 1491 nt NT seq  +upstreamnt  +downstreamnt
atggttgccgagttattagcacgtctgggcgtggcgaacagtgcccacacacaaggggac
tatccggtttacaccccgattgatggcagccagattgcctcggtcaccctggaaaacgag
gcgcaggtggtggcgcgcatcgacagcgcccacagcgcattcctgaagtggcgcaccgta
ccggccccgcgccgtggcgagctggtgcggatctttggtgaagtgctgcgcgagcacaag
gctgaccttggcgaactggtgtcggtcgaggcgggcaagatcactcaggaaggtctgggt
gaagtgcaggaaatgatcgacatctgcgacttcgccgtcggcctgtcgcgtcagttgtac
ggcttgaccatcgcttccgaacgtcctggccatcatatgcgtgaaacctggcatccgctg
ggcgtggtcggcgtgatcagcgctttcaactttccggtcgcggtctgggcatggaacacc
acgctggcgctggtctgcggcaacccggtgatctggaaaccgtcggaaaaaacgccgttg
accgcgctggcgtgccaggcgctgttcgacaaggcgctgacgattttcggtgacgcaccg
gccgcgttggcgcagttggtcattggtgatcgtgacgccggtgaagcgctggtcgatgac
ccgcgcgtgcccctgatcagcgccaccggcagcacccgcatgggccgcgaagtcggtccg
cgggttgccgcacgtttcggccgcactattctggaactgggcggcaacaacgcgatgatt
ctggcccccagcgccgatctggacctggccgtgcgcggcattctgttcagcgccgtgggc
accgccggtcaacgctgcaccacgctgcgccgtctgattgtgcaccgttcgatcaaggat
gaagtggtcgcctgcgtcaaagcggcctacgccaaggtgcgtgtcggtgacccgcgcgaa
ggcaatctgatcggcccgctgattgatcaacaggcgttctcggccatgcagaacgccctg
accaaggcccgtgacgagggcggtcaggtgttcggcggcgagcgtcaattgcaggataaa
tacccgaacggctattacgtcacgccggccatcgccgaaatgccgggtcagaccgaggtc
gtccgtcacgaaaccttcgcgccgattctttacgtactggcttatgacgactttgaagaa
gccttgcgcctgaacaacgaagtgccacaaggcctgtcgtcgtgcattttcaccactgac
ctgcgcgaagccgaggctttccagagtgcggcgggcagcgactgtggcatcgccaacgtc
aacatcggcaccagcggcgcagaaatcggcggcgcgttcggtggcgagaaagaaaccggc
ggcggtcgcgaatcaggctccgattcgtggcgcgcctacatgcgtcggcaaaccaacacc
gtcaactattcccgcgagctgccactggctcagggcatcgttttcgactga

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