KEGG T00118: PSPTO

Pseudomonas syringae pv. tomato DC3000: PSPTO_2199

Entry

PSPTO_2199 CDS T00118

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

pst Pseudomonas syringae pv. tomato DC3000

Pathway

pst00020	Citrate cycle (TCA cycle)
pst00310	Lysine degradation
pst00380	Tryptophan metabolism
pst01100	Metabolic pathways
pst01110	Biosynthesis of secondary metabolites
pst01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pst00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pst00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pst00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

2419474..2422305

AA seq 943 aa
MQESVMQRMWNSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGSSATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIHEALQQTYCRTIGSEFTHIV
DSEQRNWFMQRLESVRGRPAFSADIQSHLLERVTAAEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRDLFDEFEGKKKVELGSGD
VKYHQGFSSNVMTAGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDPNGDKVLPISL
HGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQVGFTISNPLDSRSTEYATDVAKM
IQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVIDLVCYRRRGHNEADEPSGTQPLMY
QQITKQRTTRELYAEHLIKTGVLDEARVQAKVDDYRSALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLMELPEGFVVQRQVQKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAGTYIPLQNLYAGQPRF
DLYDSFLSEEAVLAFEYGYSTTQPDALVIWEAQFGDFANGAQVVVDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAVSTLEDLAEGSFQTVIPEIDTLDPAKVTRLVLCSGKVYYDLLEKR
RAEGREDIAIVRLEQLYPFPEDDLMETIAPYTNLQHVVWCQEEPMNQGAWYSSQHHLRRS
MGNHKRELVLEYAGRDASAAPACGYASMHAEQQEKLLRDAFTV

NT seq 2832 nt +upstreamnt +downstreamnt
atgcaagaaagcgtgatgcagcgcatgtggaacagtgcccacctatccggtggtaacgct
gcctatgtggaagagctctatgagctctacctgcacgaccctaacgctgtgccagaagaa
tggcgcacctactttcagaagttgccagcagacggcagctctgccactgatgtatcgcat
tcgactattcgcgatcatttcgtgttgctggctaaaaaccagcgccgcgctcaaccggtg
tccgccggcagtgtgagcagcgagcacgaaaagaagcaggttgaagtgctgcgactgatc
caggcgtatcggatgcgtggccatcaggctgctcagctcgatccgctgggcctttggcag
cgtcctgcacccgcagatctgtcgatcaatcactacggcttgaccaatgccgatctggac
acgactttccgcgctggcgacttgttcatcggcaaagaggaagcgagcctacgcgaaatt
cacgaagcgttgcagcagacatattgtcgcaccataggctccgagttcacccacatcgtg
gattccgagcagcgcaactggttcatgcagcgtctcgaaagtgttcgtggtcgtccggcg
ttttcggctgacatccagagccacttgcttgagcgtgtcactgcggcggaaggtctcgag
aaatacctgggcaccaaatacccaggcaccaagcgtttcggtctggaaggcggcgaaagt
ctgattccgatgctcgacgagctgattcagcgttccgggtcctatggcaccaaggaagtc
gtgatcggcatggcccaccgtggtcgtctgaacgtactggtcaacaccttcggcaagaac
ccgcgcgacctgttcgacgagttcgaaggcaagaaaaaagtggaactgggttccggtgac
gtcaaataccaccagggcttctcttccaacgtcatgaccgcaggcggtgaagttcacctg
gccatggcattcaacccgtctcacctggagatcgtttctccggtggtcgagggttcagtg
cgcgcgcgtcaggatcgtcgcaacgatccgaacggtgacaaggttctgccgatttccctc
cacggcgatgcggcttttgccggtcagggcgtggtcatggaaaccttccagatgtcgcag
actcgcggcttcaagacgggcggcacgatccacatcgttatcaacaaccaggtcggtttc
accatcagcaacccgctggactcgcgttccaccgagtacgccaccgacgttgccaagatg
attcaggcgccgatcctccatgtaaatggtgatgatccggaagccgtgatgttcgtcacc
cagttggcgatcgactaccgcatgcagttcaagcgggacatcgtcatcgatctggtctgc
taccgccgtcgcggtcacaacgaagctgacgagcccagcggcacccagcctctgatgtat
cagcagatcaccaagcagcgcaccacccgtgagctgtacgccgagcatctgatcaagacc
ggcgtcctcgatgaagcccgcgttcaggccaaggtcgatgactaccgcagcgcgctggac
aacggcctgcacgtggtgaaaagcctggtcaaggagccgaacaaggaattgttcgtcgac
tggcgtccgtatctgggccatgcctggactgcgcgtcacgacacccgattcgatctcaag
accctgcaggaactgtccgccaagctgatggagttgccagaaggcttcgtcgtgcagcgt
caggtgcagaagatctacgaagatcgccagaagatgcaggccggtggcttgccgatcaac
tggggctacgccgaaaccatggcatacgccacgctggcgttcgaaggccacccgatccgc
atgacaggccaggacatcggtcgcggtacgttctcgcaccgtcacgctgtgctgcacaac
cagaaagacgccgggacttacattccgctacagaatctgtacgccggtcagccgcgtttc
gacctgtacgactcgttcctgtcggaagaggccgtgctggcatttgaatacggttactcg
actacccagccggatgcactggttatctgggaagcgcagttcggcgactttgccaacggc
gcccaagtggttgtcgaccagttcatcaccagtggtgaacacaagtggggccgtctgtgc
ggtctgaccatgctgttgcctcacggctacgaaggccaagggccggagcactcttcggca
cgtcttgagcgctacctgcaattgtgcgcagagcacaacattcaggtgtgcgtaccgacg
actccggcgcagatctaccacctgttgcgtcgtcaggtcatccgtccgctgcgcaaaccg
ttgatcgtgctgactccgaaatcgctgctgcgtcacaagctggctgtttcgacgctggaa
gatctggccgaaggctcgttccagaccgtcattccggaaatcgataccctcgatccggcc
aaggtcacgcgtctggtgctgtgcagcggcaaggtctactacgacctgctggaaaaacgc
cgtgccgaaggtcgtgaagacatcgctatcgttcgtctcgagcagctgtacccgtttcct
gaagacgacctgatggaaaccatcgcgccgtacaccaacctgcagcatgtggtctggtgt
caggaagagccgatgaaccagggtgcctggtacagcagccaacaccatttgcgtcgcagc
atgggcaaccacaaacgcgaactcgttctcgagtacgccggtcgtgatgcttctgccgca
ccagcctgtggttacgcttcgatgcacgctgagcagcaggaaaaactcctgcgcgatgcc
ttcactgtttaa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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