KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_2552
Entry
PSPTO_2552        CDS       T00118                                 
Name
(GenBank) conserved hypothetical protein
  KO
K11893  type VI secretion system protein ImpJ
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pst00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSPTO_2552
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pst02044]
    PSPTO_2552
Secretion system [BR:pst02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSPTO_2552
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: AAO56057
UniProt: Q882S3
Position
2817858..2819156
AA seq 432 aa
MLLRPQHFQHNDRYYDHQLKVRTRLAGAFNWGFTALEIDRQFLSSGQIVLNQASGIFPDG
SVFDIGDRERPLALDIAPNTSNLSVYVALPIVAGNCIEARSQEQSDVFARFTAYAASVAD
SNAGEGSSTPVVCARPEFRLLLGEPQGEHTYVMLKLCHILICSPDKAITLDAEYSATFVN
AGGSRYLMSCLKEVTSLLQHRGDVIAARISSRGQASDAEVGDFMMLQLINRSALVLRHYL
ETRHLHPEELYRLLLTLLGELATFGTETRRPRLESSYQHTDQAATFRSVMLAIRQLLSMV
VEQHALELELQPRQYGVLVSPRIDGELLGTASFVLAARAQCDAEELRVRLPSHLKVGSVE
SIRELVALHLPGIRLRPLPVAPRQIPFHANKTYFVLDINDQEQIGIDKSGGFAFHVSGEF
SGLELQFWAIRN
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgctgctgcgtccgcagcactttcagcataacgaccgttattacgatcatcagttgaaa
gtccgtacccgtctggcgggggccttcaactgggggttcacggcgctggaaattgatcgg
caatttctgagctctgggcagattgtgcttaaccaggcctcgggcatattcccggatggc
agcgtcttcgatatcggtgaccgtgagcgtccattggcgctggatattgcgcccaacact
tcaaacctgtcggtctatgtagcactgccgatcgtagcgggtaattgcatcgaggcacgc
agccaggaacagtcggatgtgttcgcgcgtttcaccgcctacgccgccagcgtcgcggat
tccaacgctggagagggcagttccacaccggttgtctgcgcgcgccccgagtttcgtctg
ctgctgggtgaaccacaaggcgagcacacctacgtgatgctcaagttgtgccatatcctg
atctgcagccctgacaaggcaataacactggacgctgaatactctgccacattcgtcaat
gccggcggttcccggtacttgatgtcgtgcctgaaggaggtcacaagcctgttgcagcac
cgaggcgatgtcattgctgcgcgcatcagttcgcgcggccaggccagcgatgccgaggtg
ggtgatttcatgatgttgcaattgatcaatcgcagtgcgttggtgcttcggcactatctg
gagactcgacatcttcaccctgaagagctgtatcgcttattgctgacgctactgggtgag
ctggcgacgtttggcactgaaacaaggcgccctcgactggaaagcagctaccaacataca
gatcaggcggcgacgttcaggagtgtgatgcttgccattcgacaattgttgtcgatggtc
gttgaacagcatgcgctggaactcgagttgcagcccaggcagtacggtgtgttggtttct
cctcgcatcgacggtgagctgctgggaaccgcctcatttgtgctggctgcccgcgcgcaa
tgcgatgccgaagaactgcgcgttcgattgccgtcgcacctcaaggtcggttctgtggag
agtatccgtgaactggtagcgttgcatcttcccggtatcaggctcaggccgctgcccgtg
gcaccccgacagatcccgtttcatgccaacaagacttacttcgttctcgacatcaacgat
caggagcagattggaatcgataagtccggagggttcgcctttcatgtgtcaggcgagttc
tcggggcttgaattgcagttttgggcgatcagaaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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