KEGG P.syringae: PSPTO

Pseudomonas syringae pv. tomato DC3000: PSPTO_2795

Entry

PSPTO_2795 CDS P.syringae

Definition DNA polymerase III, alpha subunit, putative

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway pst00230 Purine metabolism
pst00240 Pyrimidine metabolism
pst01100 Metabolic pathways
pst03030 DNA replication
pst03430 Mismatch repair
pst03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:pst00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:pst00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:pst03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:pst03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:pst03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti MetW

Other DBs NCBI-GI: 28869981
NCBI-GeneID: 1184449
JCVI-CMR: PSPTO_2795
UniProt: Q881T7

Position 3113215..3116310

AA seq 1031 aa
MNTEYAELHCLSNFSFQRGASSARELFDRALRHGYAALAITDECTLAGIVRAWQASKDTG
LPLIVGSEMHLENGPKIVLLVENLTGYQALCTLITVARRRAKKGEYRLLLEDFDHLPGGL
LAIWLADIEGDAQACLAQGNWLRERFAERLWLGVELHRGADDEQRLADLLALAQSLAIPA
VASGDVHMHARGRRALQDTITAIRHHTTVAEAGHLLFANGERHLRSLDALAEHYPDWLLA
ESLRIARRCTFTFDQLQYEYPHELVPKGQTSTSWLRELTERGIRRRWPRGLSVAARAQVE
KELALITEKKFDSYFLTVHDIVEFARSQHILCQGRGSAANSAVCYALGITELNPEKSNLL
FERFISKERDEPPDIDVDFEHDRREEVIQYIFRRYGRGRAALTAVASTYHGSGALRDVAK
VLGLPPDQINALADAFSRWSDSLPSPERLREYGFDAETPILKRVLALTGELIGFPRHLSQ
HPGGFVISEHPLDTLVPVENAAMAERTIIQWDKDDLDLVGLLKVDILALGMLSALRRTFD
LVHLHRGKQWTLASLPGDDRPTYEMISRADTIGVFQIESRAQMAMLPRLRPEKFYDLVIE
VAIVRPGPIQGDMVHPYLRRRNKEEAITYPPKLKSVFERTLGVPLFQEQVMEVAIIAADY
TPGEADQLRRAMAAWKRHGGLDPHRERLRTGMLANGYDADFADRIFEQIKGFGSYGFPES
HAASFALLTYASCWLKCHEPAAFTCALINSWPMGFYSPDQLLQDARRHHIEIRPVDVRYS
HWDCTLEPLDHPDSTRNLAIRLGLRMLRSFREEDALRIEAARSKRPFADATDLAQRAGLD
SRAAEALADSGALRGLIGHRHRARWEVAGVEAQRPLFDDVTSEEVQVTLPLPTVAEDLVA
DYATLGTTLGPHPLALLRRQLAAKRFRSSQDLLSLENNRTLSVAGLVIGRQRPGTASGVT
FVTLEDEFGMVNVVVWRDLAERQRKVLVGSQLLQVFGRLESNNGVRHLIAQRLYDLTPLL
TGLEVRSRDFQ

NT seq 3096 nt +upstreamnt +downstreamnt
atgaacaccgagtacgccgaactgcattgcctgtccaacttcagctttcagcggggcgct
tcaagcgcccgcgaactgttcgaccgcgccttgcgtcacggttatgcggcgctggcgatc
accgatgaatgtaccctggcaggcatcgtccgcgcctggcaggcatcaaaagacaccggg
ttgccgctgatcgtcggcagcgaaatgcaccttgaaaacggcccgaaaatcgtcctgctg
gtggagaacctgacgggttatcaggcgctgtgcacattgatcacggtggcgcggcgaagg
gccaaaaaaggtgagtatcggctgctgctcgaggatttcgatcacttgccgggcggcttg
ctggccatctggctggccgacatcgaaggcgacgctcaagcctgtctggcccagggcaac
tggttgcgcgagcgttttgccgaacgcctgtggctgggcgtggagttgcatcgcggcgcg
gatgacgagcagcgtctggccgacctgctggcgttggcgcagtcattggccattccagca
gtggccagtggtgatgtgcacatgcacgcccggggtcggcgcgcgctgcaggacaccatc
actgccattcgccaccacaccacggtggccgaggccgggcatctgctgtttgccaacggc
gagcgtcacttgcgttcgctggatgcgttggccgagcattacccggactggctgctggcc
gaatcgttgcgcatcgcccggcgctgcaccttcacgttcgatcaattgcagtatgaatat
ccccacgagttggtgcccaaggggcagacctccacatcatggctacgcgagctgaccgag
cgcgggattcgcaggcgctggccaaggggattgagtgtggcggcgcgggcgcaagtcgag
aaggaactggccctgatcacggaaaagaagttcgacagctactttctgacggtccacgac
attgtcgagtttgcccgcagccagcacatcctctgtcagggtcgtgggtcggcagccaac
tcggcggtatgttacgcgctggggatcaccgaactgaacccggaaaagagcaacctgctg
ttcgagcgcttcatttccaaagagcgcgacgagccaccggacatcgacgtggatttcgaa
catgaccgccgcgaagaagtcattcagtacatattccggcgttatggtcggggcagggcg
gcgctgaccgcagtggccagcacttatcacggttccggcgcactgcgtgacgtagccaag
gtgctgggcttgccgcctgaccagatcaacgcccttgcggatgcgttcagtcgctggagc
gattcacttccgtcgcccgaacgcttgcgcgaatacggtttcgatgctgaaacacccatc
ctcaagcgcgtgctggccctgaccggcgagctgatcggtttcccccggcacctgtcgcag
catccgggtggtttcgtgatttccgagcatccgctggacacgctggtgcccgtcgagaac
gcggcgatggccgagcgcactatcatccagtgggacaaggacgacctggacctggtcggc
ctgctaaaagtcgacatcctcgcactgggcatgctcagcgctttgcgcaggacgttcgat
ctggtgcacctgcaccggggcaagcagtggacattggccagtctccccggcgatgatcga
cccacctacgaaatgatcagccgcgccgacaccatcggcgtgttccagatcgaatcccgc
gcgcaaatggccatgctgccgcgcctcaggccggaaaagttttacgacctggtcatcgaa
gtcgccatcgtccgccccggaccgattcagggcgatatggttcatccgtacctgcgccgg
cgtaataaagaggaagccatcacctatccgcccaaactaaaaagtgtctttgagcgcacc
ctgggcgtgccactgtttcaggaacaggtcatggaagtggcgatcatcgccgccgattac
acccccggcgaggccgaccagctgcgccgcgcgatggcggcctggaagcgccacggtggg
ctggacccgcatcgcgagcgcctgcgcaccggcatgctggcaaacggctacgatgcggat
tttgccgatcggatcttcgagcagatcaagggctttggcagctacggctttcctgagtca
catgccgccagttttgctttgctgacctacgccagttgctggctcaaatgccatgaaccg
gcagcctttacctgcgcactgatcaacagctggccgatgggtttctacagcccggatcag
ttgttgcaggatgctcgccgccatcacatcgaaattcgcccggtggacgtgcgttacagc
cactgggattgcacgctggagccgctcgatcaccccgacagcacacgtaacctggcgatt
cgcctcgggctgcgcatgctgcgcagctttcgcgaagaagacgccctgcgcattgaagcg
gcgcgctcgaagcggccattcgccgatgccaccgacctggctcagcgcgccgggctggac
tcacgcgctgccgaggcgctggcggattccggggccttgcgcggcctgatcggccatcgg
caccgggcgcgctgggaagtggccggcgtcgaagcccagcgcccgttgttcgatgacgtg
accagcgaagaagtccaggtgacgctgccgttaccgacagtggccgaagatttggtggct
gactacgccaccctgggcaccaccctcggcccgcacccgctggctttactgcgccggcaa
ctggctgccaaacgctttcgcagctcgcaggacttgctgagcctggaaaacaaccggacc
ctcagcgtcgcggggctggtcatcggccgccaacgaccgggcaccgccagcggcgtgacc
ttcgtgaccctggaagacgaattcggcatggtcaacgtcgtggtctggcgcgacctggcc
gagcgccagcgcaaggtgctggtcggctcgcagttgctgcaggtgttcgggcggctggag
tcgaacaacggcgtacgccacctgatcgcccagcggctgtatgacctgacgccgctgctg
accgggcttgaggtgcgcagtcgggattttcagtga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)

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