KEGG T00118: PSPTO

Pseudomonas syringae pv. tomato DC3000: PSPTO_3002

Entry

PSPTO_3002 CDS T00118

Gene name

xylA

Definition

xylose isomerase

Orthology

K01805

xylose isomerase [EC:5.3.1.5]

Organism

pst Pseudomonas syringae pv. tomato DC3000

Pathway

pst00040	Pentose and glucuronate interconversions
pst00051	Fructose and mannose metabolism
pst01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:pst00040]
Metabolism; Carbohydrate metabolism; Fructose and mannose metabolism [PATH:pst00051]

SSDB

Motif

Pfam:

AP_endonuc_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

3375268..3376584

AA seq 438 aa
MSYFPTVDKVIYEGPDSDSPLAFRHYDADKRVLGKPMREHLRMAACYWHTFVWPGADMFG
VGTFKRPWQRAGDPMELAIGKAEAAFEFFSKLGIDYYSFHDTDVAPEGSSIKEYRNNFAQ
MVDRLERHQEQSGIKLLWGTANCFSNPRFAAGAASNPDPEVFAYAGAQVFSAMNATQRLK
GSNYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKH
QYDYDSATVFGFLHQYGLQDEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGD
PQNGWDTDQFPNSVEEMTLATYEILKAGGFTHGGYNFDSKVRRQSLDDVDLFHGHVAAMD
VLALSLERAAAMVQNDKLQQFKDQRYAGWQQPFGQSVLSGGFSLASLAEHAFANELNPQA
VSGRQELLEGVVNRFIYT

NT seq 1317 nt +upstreamnt +downstreamnt
atgtcgtacttccccactgtcgacaaggttatctacgaaggccccgacagcgactcgccg
cttgcctttcgccactacgacgccgacaaacgggtgctcggcaaacccatgcgcgaacac
ctgcgcatggctgcctgttactggcacaccttcgtctggccgggggctgacatgtttggc
gttggcaccttcaaacgcccatggcaacgcgccggtgacccgatggagctggctatcggc
aaggccgaggcagcgttcgaattcttctccaagctgggcattgattactacagtttccac
gacaccgatgtagcgccggaaggcagctcgataaaggaataccgcaataactttgcacag
atggtcgaccgcctcgagcggcatcaggagcagagcggcatcaagctgctgtggggcacg
gccaactgtttcagcaacccgcgttttgccgcaggtgctgccagcaacccggaccctgaa
gtatttgcctacgctggcgcccaggtgttcagtgcgatgaacgccacccagcgcctcaaa
ggctccaactacgtgctgtggggcggtcgtgaaggttacgaaaccctgctcaataccgac
ctcaagcgcgaacgcgagcaactcggtcgcttcatgcgcatggtggtcgagcacaagcac
aagataggtttcaaaggtgatctgctgattgaacccaaaccacaggagccgaccaagcat
cagtacgattacgacagcgccacggtattcggttttcttcaccagtacggcctgcaggac
gagatcaaggttaacatcgaagccaaccatgccacgctggccgggcacagcttccatcac
gaaatcgccacggcggtctcgctggggatcttcggcagcatcgacgccaatcgcggcgac
ccgcagaacggctgggacaccgaccagttccccaatagcgtcgaggaaatgaccctcgcc
acctatgaaattctcaaggccggtggttttacccatggcggctacaatttcgactcaaag
gtccgccgtcagagcctggacgatgtcgatctgttccatggccacgttgccgccatggac
gtccttgccctctcgctggagcgcgctgcggcgatggtgcagaacgataaacttcaacaa
ttcaaggaccagcgttacgcaggctggcagcagccgttcggccaatcggtgctgagcgga
ggtttcagcctcgcgtcgctggccgaacatgcgttcgccaacgaactgaacccgcaggcc
gtcagcggtcggcaggagttgctcgaaggtgtggtcaaccgctttatctacacctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

Download RDF

DBGET integrated database retrieval system