KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_3356Help
Entry
PSPTO_3356        CDS       T00118                                 

Definition
isocitrate dehydrogenase
Orthology
K00031  
isocitrate dehydrogenase [EC:1.1.1.42]
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
Citrate cycle (TCA cycle)
Glutathione metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
2-Oxocarboxylic acid metabolism
Biosynthesis of amino acids
Module
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Class
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pst00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:pst00480]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JCVI-CMR: 
UniProt: 
Position
3793079..3795310
Genome map
AA seq 743 aa AA seqDB search
MSNRSKIIYTFTDEAPALATYSLLPIIEAFTASSDIDVETRDISLAGRVLSSFPESLGAD
QQVPDHLAELGKLATTPEANIIKLPNISASVPQLKATIKELQEQGFNIPDYPENPATDAE
KEIRARYDKTKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWASDSKAHVAHMSNG
DFYGSEKAAQIEADSTVKIELVAQDGTTTVLKEKTALKAGEIVDCSVMSAKALRSFIAAE
IEDARKQGVLFSVHLKATMMKISDPIMFGQIVAEFYKDALTKHADTLKQIGFSLNNGIGD
LYERISALPAEKQAEIKADIEAVYAVRPQLAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGKMWGTDGQLHDAKAVIPDRCYATIYQAVIEDCKKNGAFDPTTMGSVPNVGLMAQKAEE
YGSHDKTFHIQTNGVVRVTDGQGNLLMEQNVEAGDIWRMCQAKDAPIQDWVKLAVNRARA
SNTPAIFWLDASRAHDSVMIEKVRKYLGDHDTSGLDIQILSPVDAMKLTLERTRAGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFVEENFL
RWDSLGEFLALAASLEHLGNAYNNPKALVLSKTLDQATGEFLDRNKSPSRKVGGIDNRGS
HFYLTLFWAQALAAQDDDADLKAQFTPLAKTLTDNEEKIVAELNAVQGKPVDIGGYYFAN
PEVTSKAMRPSATLNAAIDALKA
NT seq 2232 nt NT seq  +upstreamnt  +downstreamnt
atgtccaaccgctcgaagatcatctacaccttcaccgacgaagctccggccctcgccacc
tactcgctgctgcctatcatcgaagctttcacagcctcctccgatatcgacgtggaaacg
cgcgacatctctctggcgggccgtgttctttccagcttcccggagtcgcttggcgccgat
caacaagtgccggatcatctcgccgagctgggcaaactggccaccacgccagaagccaac
atcatcaagctgcctaacatcagcgcttcggtcccacaactgaaagcgaccatcaaggag
cttcaggagcagggcttcaacatccccgactacccggaaaaccctgccactgacgcggaa
aaagaaatccgcgcgcgttacgacaagaccaagggcagcgctgtaaacccggttctgcgc
gaaggcaactccgatcgtcgtgccccactgtcggtcaagaactacgcgcgcaagcacccg
cacaaaatgggcgcctgggcttccgactccaaggcccacgttgcgcacatgagcaacggc
gacttctacggcagcgaaaaagccgcgcagatcgaagctgacagcactgtaaagatcgaa
ctggtcgctcaggacggcaccaccaccgtcctgaaagaaaaaacggccctgaaggccggc
gagatcgtcgactgctcggtcatgagcgccaaagcactgcgcagcttcattgccgccgag
atcgaggacgcccgcaagcaaggcgttctgttctcggtgcatttgaaagccaccatgatg
aagatctccgacccgatcatgttcggtcagatcgtcgccgagttctacaaggatgcgctg
accaagcacgctgacacgctgaaacagatcggcttcagtctgaacaacggcatcggtgac
ctttacgagcgcatcagcgccctgcctgccgagaaacaggcggaaatcaaggctgacatc
gaagcggtctacgcggttcgtccacagctggcgatggtcaactccgacaagggcatcacc
aacctgcacgtaccgagcgacgtgatcgtcgacgcatcgatgccggccatgatccgtgac
tcgggcaagatgtggggcacagacggccaactgcacgatgccaaagcagtgatcccggat
cgttgctacgccaccatctatcaagccgtcatcgaagactgcaagaaaaatggcgctttc
gaccctaccaccatgggcagcgtaccgaacgttggcctgatggcgcagaaggccgaagaa
tacggctcccacgacaagactttccacatccagaccaatggtgtggttcgtgtgaccgac
ggccaaggcaacctgctgatggaacagaacgtcgaagcgggcgatatctggcgcatgtgc
caggccaaggacgcgccgatccaggactgggtcaaactggcggtcaaccgcgctcgcgcc
agcaacacgccggccatcttctggctggacgcttcccgcgcccacgacagcgtgatgatc
gagaaagtccgcaagtacctgggcgaccacgatacgtcgggcctggacatccagattctt
tcgccagtcgacgccatgaagctgaccctggagcgcactcgcgccggtaaggacaccatt
tcggtgaccggtaacgtgctgcgcgactacctcaccgacctgttcccgatcatggaactg
ggcaccagcgcgaagatgctgtcgatcgttccgctgatgaacggtggcggcctgttcgaa
accggcgccggcggttcggctcccaagcatgttcagcagttcgttgaagaaaacttcctg
cgctgggattcgctgggcgagttcctggccctggcggcctcgctggagcacctgggtaac
gcgtacaacaacccgaaagcgctggttctgtccaaaaccctcgaccaggccactggcgag
ttcctggatcgcaacaagtcgccttcgcgcaaggtcggcggtatcgacaaccgcggcagc
catttctacctgaccctgttctgggcgcaggcactggctgctcaggatgacgacgcagac
ctcaaggcgcagttcacgcctctggccaaaaccctgaccgacaacgaagaaaaaatcgtt
gccgagctgaatgccgttcaaggcaagccagtggacattggcggttactatttcgccaat
ccggaagtaaccagcaaagccatgcgccctagcgcaacgctcaacgcagctattgatgcg
ttgaaagcgtaa

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