KEGG T00118: PSPTO

Pseudomonas syringae pv. tomato DC3000: PSPTO_4413

Entry

PSPTO_4413 CDS T00118

Gene name

murE

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

pst Pseudomonas syringae pv. tomato DC3000

Pathway

pst00300	Lysine biosynthesis
pst00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:pst00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:pst00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase DUF2209

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

complement(4981218..4982681)

AA seq 487 aa
MAFNLSKIFAHTDRDPLIRELTLDSRNVRPGDLFLAVPGIKVDGRAHIADALKRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDVAGRFYGDPSRSLNLVGVTGTNGKTSVTQLVA
QALDALGQRCGIVGTLGTGFYGALQSGRHTTPDPIAVQAALTDLRKAGARAVAMEVSSHG
LDQGRATALAFDVAVLTNLSRDHLDYHGTMEAYAAAKAKLFAWPNLNCRVINLDDDFGRE
LAGLKQESRLITYSQLDSSAYLYCRDAKFDDDGVRATLVTPQGEHFLRSSLLGRFNLSNV
LAAVGALLGLDYALDEILKVLPKLEGPVGRMQRLGGADKPLVVVDYAHTPDALEKVLEAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVWVTDDNPRSEAPTNIFDDIRPGF
VTADKVRFIEGRGQAIAELIASATVDDVVVLAGKGHEDYQEIDGKRQPFSDLEEAATALA
AWGPEND

NT seq 1464 nt +upstreamnt +downstreamnt
atggcctttaatctcagcaagattttcgctcataccgaccgcgatcccttgatccgcgag
ttgacactcgacagccgcaatgttcgtccaggtgacctgtttctggctgtgccgggtatc
aaggtcgatggtcgcgcgcacattgccgacgcactcaagcgcggcgcagcagcggtggcc
tacgaggtcgaaggtgcaacggttctgccgatcaccgacgtgccgctgattccggtcaaa
gggctggcagcgcagttgtccgacgttgccggtcgcttctacggcgacccgagccgcagc
ctgaatctggtgggcgtcaccggcaccaacggcaagaccagcgtcacccagctggttgct
caggcgctcgacgcgctgggtcaacgctgcggcatcgtcggcaccctcggcaccggcttt
tacggcgcactgcaaagcggccgtcataccactcctgatcccattgccgttcaggcagcg
ctgaccgacctgagaaaggcgggcgcgcgcgccgtggctatggaagtgtcgtcccacggt
ctggatcaaggcagggctacggcgctggcgttcgacgtggcagtgctgaccaatctgtct
cgtgatcacctggattatcacggcaccatggaagcttacgcggcagccaaggccaagctg
ttcgcgtggccgaatctgaactgccgggtgatcaatctggatgacgattttggtcgcgaa
ctggctggcctcaagcaagaatcgcggttgatcacctacagccagctggatagctcggct
tacctgtactgccgcgacgcgaaatttgatgacgatggcgtgcgcgccacactggtcacg
cctcagggcgagcatttcctgcgcagcagcctgctggggcgcttcaacctgagcaacgtg
ctggcagcggtcggcgcactgctggggctggactacgcgctggacgaaattctcaaggta
ctgcccaaactcgaagggccggtcggccgcatgcagcgtctgggcggcgccgacaagcct
ctggtggtcgtggattacgcgcacaccccggacgcgctggaaaaagtgcttgaagcactg
cgtccgcacgccaaaggccgcctgttgtgcctgttcggctgcggcggtgatcgcgatcgc
ggcaaacgcccgttgatggctgaagttgtcgaaagactggctgacggcgtctgggttact
gatgacaacccgcgctccgaggcaccgaccaacatttttgacgacattcgtccaggtttc
gtaacggccgacaaagtgcgcttcatcgaaggtcgtggtcaggccattgccgagctgatc
gccagcgcaactgtcgatgacgtggtggtgctggcgggcaaaggccacgaggactatcag
gaaatcgacggcaagcgccagccgttttccgatctggaagaagccgccacggcgcttgcc
gcatgggggcctgagaatgattaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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