KEGG   Stutzerimonas decontaminans: UIB01_00020
Entry
UIB01_00020       CDS       T03366                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pstu  Stutzerimonas decontaminans
Brite
KEGG Orthology (KO) [BR:pstu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pstu03032]
    UIB01_00020 (gyrB)
   03400 DNA repair and recombination proteins [BR:pstu03400]
    UIB01_00020 (gyrB)
Enzymes [BR:pstu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     UIB01_00020 (gyrB)
DNA replication proteins [BR:pstu03032]
 Prokaryotic type
  DNA Topoisomerases
   UIB01_00020 (gyrB)
DNA repair and recombination proteins [BR:pstu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      UIB01_00020 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: AHY40916
UniProt: A0A023WLQ0
Position
3813..6227
AA seq 804 aa
MSENHTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSD
ISITIHTDESITVRDNGRGIPVDIHEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEELMLTIRREGKVWEQLYRHGVPQAPLAPVGETDSSGTQIHFKPSAETFQNI
HFSWDILAKRLRELSFLNSGVGIVLRDERTAKEELFKYEGGLSAFVAYLNTNKTPVNEVF
HFNVQRDDGVGVEVALQWNDSFNENILCFTNNIPQRDGGTHLAGFRSALTRNLNSYIEQE
GLAKKHKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKHFADF
LLEHPSEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL
YIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGR
DEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYVYIAQPPLYKVKRG
KQEQYIKDDEAMEEYLTQSALEDASLHVNEGAPGLSGGALEKLVNDYRTVMKTLQRLSRL
YPQELTEHFIYLPRVPVEQLADHSAMQAWLEQYSALLKVGERSGLIYNVSLREDKERHLW
LPEVEISSHGLASYITFNRDFFGSNDYRTVTALGEKLNSLLEEGAYVQRGERKKQVSTFK
QALEWLMAEGTRRHSVQRYKGLGEMNPDQLWETTMDPNVRRMLKVTIEDAIGADQIFNTL
MGDAVEPRRDFIETNALAVSNLDF
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgagcgaaaaccacacgtacgattcgtcgagcatcaaggtactcaaaggcctcgatgca
gtgcgcaagcgccctggcatgtacatcggcgataccgacgacggcaccggcctgcaccac
atggtcttcgaggtcgtggataactcgatcgacgaagcgctggccggccattgcagtgac
atctccatcaccatccataccgatgagtccatcaccgttcgtgacaacggtcgcggtatc
ccggtggatatccacgaggaaggtgtttcggcggccgaggtcatcatgaccgtgctgcac
gctggtggtaagttcgatgacaactcctacaaggtatccggcggactgcacggcgtaggt
gtttcggtggtcaacgcgctgtcagaggagttgatgctgactatccgccgcgagggaaaa
gtgtgggagcagctctaccgtcatggtgtgccccaggcgccgctcgccccggtcggtgaa
accgattcctcgggcacgcaaatccatttcaaaccgtcagcagagacgttccagaacatc
catttcagctgggacattctggccaagcgtctgcgcgagctttcctttctgaactctggc
gtcggtatcgttctgcgtgacgaacgtactgccaaggaagagttattcaaatacgagggc
ggtctgagcgccttcgttgcctacctgaacaccaacaaaacgccggtcaacgaggtgttc
cacttcaacgttcagcgcgacgacggcgttggtgtcgaggtggcgctgcagtggaacgac
agcttcaacgagaacattctctgctttaccaacaatatcccgcagcgcgacggcggcacc
catttggccggtttccgctccgcgctgacgcgaaacctgaacagctacatcgagcaggaa
ggcctggccaagaagcacaagatcgccactaccggcgacgatgcccgcgaaggtctgacc
gcgatcatttccgtgaaggttccggatcctaagttcagctcgcaaaccaaggacaaacta
gtttcctcggaggtgaaaaccgccgtggaacaggagatgggcaagcacttcgccgacttc
ctgcttgagcatccaagcgaagcaaaggcagtggttggcaagatgatcgacgctgcccgt
gctcgcgaagctgcgcgcaaggcacgggaaatgacccggcgcaagggcgctctggatatc
gccggcctgccgggcaagctcgcagattgccaggaaaaggatcctgcgctgtccgaactc
tacatagtggagggtgattctgcgggtggctcggccaagcagggccgtaaccgcaagacc
caggcaatcttgccgctcaagggcaagatcctcaacgtcgagaaagcacgcttcgacaag
atgatttcttcccaggaagtgggcacgctgattaccgctctgggctgtggtatcggccgc
gatgaatacaacatcgataaactgcgctaccacaacatcatcatcatgaccgacgccgat
gtcgacggttcgcacatccggactctgctgctgacgttcttcttccgtcagctgcctgag
ctgatcgagcgcggttacgtgtatatcgctcagccgccgctgtacaaggtcaaacgcggc
aagcaggagcagtacatcaaggacgatgaggcgatggaggaatacctcactcagtccgct
ctggaagacgccagcctgcacgttaacgaaggcgccccggggctttctggcggagcgctg
gagaagctggtcaacgattaccgcacggtgatgaagacgttgcagcggctgtcacgtctg
taccctcaggaactgacggaacacttcatctacctgccgcgtgtgcctgtagagcaactg
gccgatcactcggcgatgcaggcatggctcgagcaatacagcgcgctgctcaaggttggc
gaacgctccggtttgatctacaacgtcagcctgcgcgaggacaaggaacgccatctgtgg
ctgccggaagtggagatcagttcgcacggcctggctagctacatcacctttaaccgtgac
ttcttcggcagcaacgactaccgaaccgttacggcgcttggcgagaagttgaacagcctg
ctcgaagaaggcgcctacgttcagcggggcgagcgcaagaaacaggtgtccaccttcaag
caagcacttgaatggttgatggccgaaggcacccgccgccatagcgttcagcgatacaag
ggactgggcgaaatgaacccggatcagctgtgggaaaccacgatggacccgaacgtgcgg
cgcatgctcaaggtaactatcgaggatgcgattggtgcggatcagatcttcaataccctg
atgggcgatgctgtcgagccgcgtcgagatttcatcgaaaccaacgctctggctgtgtcg
aacttggacttctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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