KEGG   Stutzerimonas decontaminans: UIB01_01205
Entry
UIB01_01205       CDS       T03366                                 
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pstu  Stutzerimonas decontaminans
Pathway
pstu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pstu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    UIB01_01205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pstu03400]
    UIB01_01205
Enzymes [BR:pstu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     UIB01_01205
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     UIB01_01205
DNA repair and recombination proteins [BR:pstu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     UIB01_01205
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DZR
Other DBs
NCBI-ProteinID: AHY41142
UniProt: A0A023WLV5
Position
250302..251114
AA seq 270 aa
MPELPEVETTRRGIEPYLVGQRVSRVLVRDRRLRWPIPEDLDVRLSGQRIEAVERRAKYL
LIKAESGTLIVHLGMSGSLRLVDAALPAAKHEHVDILLESGQALRYTDPRRFGAMLWSDE
PLAHVLLANLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRRPAGSISRARYLKLGEEIRRILAMAIERGGTTLRDFVGGDGKPGYFQQELFVYGR
AGAFCKNCGSTLREIRLGQRASVYCARCQR
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcccgaacttcccgaagtcgaaactacccgccgcggcatcgagccataccttgttggt
cagcgtgtcagccgcgtgctggtgcgtgaccggcggttgcgctggccgatcccggaagac
ctcgatgtgcgtctttccggccaacgcatcgaggcggtcgaacgtcgcgccaaatacctg
ctgatcaaggccgagagcggcacgctgatcgttcatctgggcatgtccggtagcctgcgg
ctggtcgacgcggcattgccggcggccaagcacgagcacgtcgatatcctgctggaatcc
ggccaggcgctgcgctacaccgatccgcgacgcttcggcgcgatgctctggagcgatgag
ccgctcgcacatgtgttgctcgccaacctcgggcccgagccgctgggtgaggatttcgac
ggtgaccggctgtatcggctgtcccgcgggcgcagcatggcggtcaagccgttcatcatg
gataacgcggtggtggtgggcgtcggcaatatctatgcgagcgaggcgctgttcgccgcc
ggcatcgacccgcggcgcccggcaggaagcatctcgcgagcgcgttacctcaaactgggc
gaggaaatccggcgaatactggcgatggccatcgagcgcggcggcacgacgctgcgcgat
ttcgtcggtggcgatggcaagcctggttacttccagcaggagttgttcgtctacggccgg
gccggcgcattctgcaagaactgcggtagcacgctacgcgagattcgcctcggccagcgc
gccagcgtgtattgcgctcgttgccagcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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