KEGG   Pantoea stewartii subsp. stewartii: DSJ_16955
Entry
DSJ_16955         CDS       T04970                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
pstw  Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:pstw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pstw03032]
    DSJ_16955
   03400 DNA repair and recombination proteins [BR:pstw03400]
    DSJ_16955
Enzymes [BR:pstw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DSJ_16955
DNA replication proteins [BR:pstw03032]
 Prokaryotic type
  DNA Topoisomerases
   DSJ_16955
DNA repair and recombination proteins [BR:pstw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DSJ_16955
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: ARF50854
UniProt: H3REW8
Position
complement(3453949..3456591)
AA seq 880 aa
MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYYTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHDLLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLREVINGCLAYIEDENISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARGEVEVDAKTGRETIVIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMALKEILEAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPTPAEAKAGLISQSWALGNV
AAMLERAGDDAARPEWLEAQFGIRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKQ
LLDQIAELLHILSSSERLMEVIREELELMRDQFGDDRRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYTEGFNIFMATASGTVKKTGL
QEFSRPRSAGIIAINLRDDDELIGVALTNGNDEAMLFSAAGKVVRFAESAVRAMGRTASG
VRGIKLAQNDRVVSLIVPREEGAILTVTQNGYGKRTANSEYPTKSRATQGVISIKVTERN
GPVIGAVQVVDSDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAEDENVVGLQRVA
EPVEEEELDAIDGSVAEGDDDIVPEVDNDDDDEPAVDDDE
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgagcgaccttgcgagagaaattacaccggttaatatcgaagaagagttaaaaaattct
tacctcgattacgccatgtcggtcattgttggccgagctttacccgatgtgcgtgatggc
ctgaagccagtacatcgccgcgtactctacgcgatgagcgaactgggtaatgactggaac
aaaccctataaaaaatctgcccgcgtcgtcggtgacgttatcggtaaatatcacccgcat
ggtgattctgccgtttactacaccatcgtacgtatggcccagcctttctccctgcgttac
atgctggtggacggtcaaggcaacttcggatccatcgacggcgactccgctgcggcgatg
cgttataccgaagtgcgcatgtctaaaatcgcccacgacctgttagctgatctggaaaaa
gagaccgttgatttcgtaccgaactacgacggtaccgagcagatccctgaagttctgccc
accaaaatccctaacctgctggtcaacggatcgtccggtattgccgtcggtatggccact
aacattccgccgcataacctgcgcgaagtgattaacggctgcctggcttatattgaagat
gaaaacatcagcgttgaagggctgatggaacacattccggggcctgatttcccgacggcg
gccattatcaacgggcgtcgcggcattgaagaagcctatcgcaccggtcgcggtaaagtt
tacatccgtgcccgtggtgaagtggaagtggatgccaaaaccggacgtgaaaccatcgtc
attcacgaactgccctatcaggtgaacaaagcgcgcctgatagaaaagattgccgagctg
gtgaaagaaaagcgcgtcgaaggaatcagtgcgctgcgcgatgagtctgataaagacggc
atgcgtatcgtcattgaaatcaagcgtgacgccgttggtgaagtggttctcaataacctc
tattccctgactcagttgcagacctctttcggtatcaacatggtcgctctccatcagggc
cagccgaagattatggcgctgaaggagattctcgaagccttcgttcgccatcgccgtgaa
gtggtgacacgccgtactattttcgaactgcgcaaggcgcgcgatcgggcacatatcctt
gaaggtctggcgattgcgctggctaacatcgatccgattatcgaactgattcgccgcgca
ccaacgccagcggaagcaaaagcgggtctgatctcgcaatcgtgggcgctgggcaatgtg
gccgcgatgctggaacgtgcaggcgacgatgcggcccgtccagagtggctggaagcgcag
ttcggtatccgtgatggtcagtattacctgacagaacaacaggcgcaggccattctggac
ttacgtctgcagaagctgaccggccttgagcatgagaagctgctggacgagtacaaacag
ctgctggatcagattgcagaattactgcacatcctgtccagctcagaacgtctgatggaa
gtcattcgcgaagagcttgagctgatgcgcgatcagttcggcgacgaccgccgcactgaa
attacggctaacagcgccgacatcaacatcgaagacctgatcaatcaggaagatgttgtg
gtgacattgtcgcatcagggctatgtgaaatatcagccgctgagcgactatgaagcccag
cgccgtggcggtaaaggcaagtctgccgcccgaatcaaagaagaagactttatcgatcgt
ctgctggtggcgaatacccacgacacgatcctgtgcttctccagccgtggccggctctac
tggatgaaagtctaccagttgcctgaagccagccgtggtgcacgtgggcgtcctatcgtt
aacctgttgccgctggaagccaacgaacgtattacggcgattctgccggtacgtgaatac
accgaaggctttaatatcttcatggctaccgccagcgggaccgtgaagaaaacgggtctg
caggagtttagccgcccacgtagcgcaggcattatcgcgattaacctgcgtgatgacgat
gagctgatcggtgtggcgctgacgaacggcaacgatgaggcgatgttgttctctgcggcc
ggtaaggtggtgcgctttgcagaatccgcggtacgtgccatgggccgaacggcttcgggc
gtacggggcattaagctggcgcaaaacgatcgcgtagtttcgctgatcgtgccgcgtgaa
gagggcgctattcttacggttacgcagaacggctacggtaagcgtaccgcgaacagtgag
tacccgaccaaatcccgtgcaacgcagggcgtgatttccatcaaagtaactgagcgtaat
ggcccggttattggtgcggtacaggttgtcgacagcgatcagatcatgatgatcaccgat
gccggcacactggtaagaacccgtgtctccgaagtcagcatcgtgggccgtaatacccag
ggtgtgatcctgattcgtacagccgaagacgagaatgttgtcggtctgcagcgcgtagcg
gaaccggtggaagaagaagagctggatgctatcgatggcagcgtggcggaaggggacgat
gatatcgtacctgaagtcgacaatgacgacgatgatgaaccggcagtggacgacgacgag
taa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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