KEGG T04469: BFS30

Pedobacter steynii: BFS30_23635

Entry

BFS30_23635       CDS       T04469

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

psty Pedobacter steynii

Brite

KEGG Orthology (KO) [BR:psty00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psty03032]
    BFS30_23635
   03400 DNA repair and recombination proteins [BR:psty03400]
    BFS30_23635
Enzymes [BR:psty01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BFS30_23635
DNA replication proteins [BR:psty03032]
Prokaryotic type
  DNA Topoisomerases
   BFS30_23635
DNA repair and recombination proteins [BR:psty03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BFS30_23635

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim

Other DBs

NCBI-ProteinID:

AOM79890

UniProt:

A0A1D7QMK0

Position

complement(5710752..5713331)

AA seq 859 aa
MAKNLLIVESPAKAKTIEGYLGKDFLVKSSYGHIRDLVKGDMGIDVANNFAQTYEVPADK
KQVVAELKKLAKEAEMVWLASDEDREGEAISWHLYETLGLKENKTKRIVFHEITKPAILK
AIETPRTIDYNLVNAQQARRVLDRLVGFELSPVLWKKIKPSLSAGRVQSVAVRLIVDRER
EVNKFNATAAFKVSAQFSTGKGKEVVKAELPQRFELEADAEKFLNDCIKAGFSVDSLETR
PAKRNPAPPFTTSTLQQEASRKLGYSVSRTMQVAQRLYESGRITYMRTDSVNLSETALQA
ASAEIKSAWGDKYHQIRTYKTKTAGAQEAHEAIRPTYFNHHTVPGDSSEQRLYELIWKRA
IASQMSEALFEKTTAQIAISTRKENLVAEGEVLRFDGFLKVYLESSDEEDVEDSEGNNML
PPLSKGQELSLKEMNATERFSRPPARYTEASMIKKLEELGIGRPSTYAPTISTIQNRGYV
VKEDRDGRQRSFSAIVLSNGVVTKQIKTEITGAEKSKLFPTDIGEVVNDFLVEHFKGIVD
FNFTANVEKEFDEIAQGLQEWTKMLHSFYTPFHLEVETTLENADRANGERLLGIDPVSGK
NVYAKVGKFGPLVQIGQNDDEEKPRYASLSKSQSVATVTLEDALEQFKLPFQLEDYEGKE
VSVGVGRFGPYVKWGDAYISIPKNEDPLSVDRDRAIEIIAEKVNADAPVAHYESLPVTKG
KGRFGPFIKWNDLFINVPKAYNFDFLSQKDIEELIGKKVEKEANRFIQQWTAEKIAIENG
RWGPFIRFGKDMLKLGKNPATGEKYTPEDLAGVSLEEVKKLIVEQVPNAFEPKAAKKKAA
AKSPAKKAPAKKKAAVTKK

NT seq 2580 nt +upstreamnt +downstreamnt
atggcgaagaatttattaatagttgagtcacctgcaaaagctaaaaccatcgaagggtat
ttaggaaaagatttccttgttaaatcaagttacgggcatatccgggatttggtaaagggg
gacatgggtattgatgtagccaataatttcgcccagacctatgaggttcctgcagataaa
aaacaggtcgtagcagaacttaagaaattagcgaaggaggccgaaatggtatggctcgcg
tccgatgaggaccgtgagggagaagcgatttcatggcatttatacgaaacattaggatta
aaagaaaataaaacgaaaaggattgtctttcacgagattacaaagcctgccatattaaag
gcaatagaaactcctcgtacgatagattataacctcgtgaatgcccagcaagccagacgc
gtattggacagactggtaggttttgagctctcccctgttttatggaaaaaaataaaacct
tctttatctgccgggcgggtacagtctgtggctgttcgtttgattgtagacagagaaaga
gaagtcaataaatttaatgctactgcggcatttaaagtttctgcacagttcagtaccgga
aaaggtaaggaagtagtaaaggccgaattgccccagcgttttgagctggaagctgatgca
gagaaatttttaaatgattgtattaaagcaggttttagcgtggatagtctggaaaccaga
cctgcgaaaagaaaccctgctcctcctttcactacttcgaccttacaacaggaagcctct
cgtaaactgggatattcagtgtcaaggacgatgcaggtagcacagcgcctgtacgaaagt
ggaagaatcacctatatgcgtaccgattcggtaaacctttctgaaactgcattacaagct
gcttcagcagagatcaaatcggcatggggtgataaataccatcagatcagaacttataaa
acgaaaacagcaggtgcacaggaagctcacgaagccatccgccctacttatttcaaccac
cataccgtacccggcgatagttcggaacaacgcttatatgaattgatctggaagcgtgcc
attgcttcacagatgagcgaagcgttgtttgaaaaaacaacagcacagattgccatcagt
acacgtaaagaaaatctggttgctgaaggtgaagtactcagatttgatggtttcttaaag
gtatacctggaatcaagcgatgaagaagatgtggaagattccgaagggaacaacatgctt
cctccattgtccaaaggacaggaactgagcctgaaagagatgaatgcaacggagcgtttc
tcccgtcctcctgccagatatactgaggcaagtatgatcaagaaactggaagaacttggc
attgggcggccttccacgtatgcgcctaccatctctacgattcagaaccgtggttacgtg
gttaaagaagaccgtgatggtcgtcagcgttccttcagtgcaatcgtactgagcaatggc
gtggtgactaaacagataaaaacagaaattacaggggcagagaaatcaaagcttttccct
acagatatcggcgaagttgtaaatgacttcctggtcgaacattttaaaggaattgtcgat
tttaatttcactgcgaacgtagaaaaggaatttgatgaaattgcccaggggcttcaggaa
tggacaaaaatgctccactccttctatactcctttccatttggaagtagaaactaccctt
gagaatgcagaccgtgccaacggagagcgtttattgggaattgatcctgtttcgggaaaa
aatgtatatgctaaagtgggtaaattcggaccattggtgcagatcggacagaatgatgat
gaggaaaaaccgcgttatgcaagcttatccaaatcacagtctgtagccacggtaacactt
gaggatgcattggaacagtttaaacttcctttccagctggaagattacgaaggtaaagaa
gtttctgtgggggtgggccgttttggtccatatgtgaaatggggcgatgcctacatttcc
attcctaaaaacgaagatccgctgtcggtagacagagaccgtgccatcgaaattattgct
gaaaaggtaaatgctgatgcacctgtggcgcattatgaaagtttaccggttactaaaggt
aaaggtcgttttggtccttttatcaaatggaatgacctcttcatcaacgtacctaaagct
tataactttgatttcctgagccagaaagatatcgaagaactgatcggtaaaaaggtagag
aaggaagcaaaccggtttatccagcaatggacagcagaaaagattgccattgaaaacggc
agatggggacctttcatccgtttcggtaaagacatgctgaaactgggtaaaaacccggct
acaggagaaaaatatactcctgaagaccttgctggtgtatctcttgaagaagtaaagaaa
ctaattgtagaacaggtaccaaatgctttcgaacctaaagcggccaagaaaaaagcagcg
gcgaagagcccggcaaaaaaggctccggcaaaaaagaaagcagcagtaacgaaaaagtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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