KEGG   Pseudoxanthomonas suwonensis 11-1: Psesu_2894Help
Entry
Psesu_2894        CDS       T01403                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
psu  Pseudoxanthomonas suwonensis 11-1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:psu00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Psesu_2894
Enzymes [BR:psu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Psesu_2894
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Psesu_2894
DNA repair and recombination proteins [BR:psu03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Psesu_2894
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
3143152..3143967
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTRRGLAPHVEGRRVTTVTLRRPDLRWPIPREVVEELPGRRIAAVRRRAKYL
LLDTDRGDSALLHLGMSGMLRVLPPETPVNTHDHVDISLDSGRVLRFTDPRRFGCLLWQP
AGTVHELLQDLGPEPLSGDFDGDWLYARSRGRSAPVKAFLMDQRIVVGVGNIYAAESLFR
AGISPLRAAGKVSRARYIALADAVKEILGYAITRGGTTLRDFLNPDGAPGYFEQELAVYG
RGGLPCPACGTPLREASIGQRTSAWCPRCQR
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagctgcccgaggtcgagaccacccgccgcggcctggcaccgcacgtggaggga
cgccgggtcaccaccgtcaccctgcgccgccccgacctgcgctggccgatcccgcgggag
gtggtggaggaactgccggggcggcgcatcgccgcggtccgtcgccgcgccaagtacctg
ctgctggacaccgaccggggcgacagcgccctgctgcacctgggcatgtccgggatgctg
cgggtactgccgccggaaacgccggtgaacacccacgaccatgtcgacatcagcctggat
tcgggccgggtactgcgcttcaccgacccgcgccgtttcggctgcctgctgtggcagccg
gccggcaccgtgcacgaactgctgcaggacctgggtcccgagccgctgtccggggacttc
gacggcgactggctatacgcccgcagccgtggccgcagcgcaccggtgaaggcattcctg
atggaccagcggatcgtggtcggcgtgggcaacatctatgcggccgagagccttttccgc
gccggcatctcgccgctgcgggcggccggcaaggtctcccgtgcccgctacatcgccctg
gccgatgcggtgaaggaaatcctcggctacgccatcacccgcggcggcaccaccctgcgc
gacttcctcaatccggacggcgcgccgggatatttcgagcaggagctggcggtctacggc
cgcggcggcctgccctgcccggcctgcggcacgccgctgcgcgaggccagcatcggccag
cgcaccagtgcctggtgcccacgctgccagcgttga

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