KEGG   Candidatus Planktophila sulfonica: A1sIA56_04075
Entry
A1sIA56_04075     CDS       T05158                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
psuf  Candidatus Planktophila sulfonica
Brite
KEGG Orthology (KO) [BR:psuf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psuf03016]
    A1sIA56_04075
Enzymes [BR:psuf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     A1sIA56_04075
Transfer RNA biogenesis [BR:psuf03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    A1sIA56_04075
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC SspP
Other DBs
NCBI-ProteinID: ASY16079
UniProt: A0A249KHB0
Position
815367..816650
AA seq 427 aa
MSEVEELPTAIPLLHPAEGVPAIIDTEEAFDAALAQLASGTGPYAFDAERASGYKYSARA
YLIQIKRTGGGLHLIDPIPFGPGHRCFVALNALIQDVEVILHASTQDLPCLREVGIFPNI
LFDTELGGRIAGLPRVGLGPLLETLMSVSLAKEHSAVDWSTRPLPHDWLNYAALDVELLV
ELRDKVYQLLVDAKKSKWAEEDFASIIAAPPAPPRVDPWRRTSGMHKVKKRNHMAVIREI
WQARNELAQELDVSPSRLLSDLAITEIALASDKGPITNRKHLEKILRPLGLRARWLENAA
TWISCITDAIAMPEDQWPEARSKTDAMPPIKIWRERFPEKYAPLTHARFNLQVRAEELSI
PLENMISPELVRRICWQPPTSSVHEALLAMGARRWQAEIASPILELALTETEPLEVAEPE
AEVTPTE
NT seq 1284 nt   +upstreamnt  +downstreamnt
gtgtctgaagtagaagaacttcccaccgcaattcctttgctgcatccagcagagggagtt
cccgcgatcatcgacaccgaggaagcatttgatgcagctcttgcacagttagcttcaggc
actggcccttatgcattcgatgcagaacgtgcatctggatataaatacagcgcccgtgca
tacctgattcaaatcaaacgtactggcggcgggttgcacctcattgatccaattccattt
gggccaggacaccgctgttttgttgcacttaacgcacttatccaagacgttgaagtcatc
ttgcatgcaagtacgcaagaccttccctgccttcgcgaagtcggcatatttcctaacatt
ctcttcgataccgaactcggcggtcgtatcgcagggcttccgcgcgtaggtcttggtccg
ctcctcgaaacgttgatgagcgtctctcttgcaaaggaacactctgcagttgattggtct
actagaccacttccccatgattggttgaactacgcagcacttgacgttgaacttcttgtc
gagttgcgcgacaaggtttaccaactcttggtcgatgccaagaaatcgaaatgggctgaa
gaagattttgcatcaatcattgcagctccaccggcgccaccgcgagtagatccatggcgc
agaacttctggaatgcataaggtgaagaagcgcaatcacatggcggtaatccgcgaaatc
tggcaggcgcgtaatgaacttgcacaagaattagatgtatcgcccagccggcttttatca
gatttagcaattacagaaattgctctcgcttcggataagggtcccattaccaatcgcaaa
catcttgaaaaaattctgaggccgctgggcttgcgagcgcgctggttagaaaatgctgca
acatggattagttgtattaccgatgccattgcaatgccagaagatcaatggcctgaagcg
cgttctaaaactgatgcgatgccaccgattaaaatttggcgcgagcgctttcctgaaaag
tacgcacctctcactcacgcgcgatttaatttgcaggtacgggctgaggaactttccatt
cctcttgaaaatatgatctcccccgaactggtccgccgtatctgttggcagcctccgacc
tcatctgtgcacgaagccctgctcgccatgggagcgcgccgctggcaggctgagattgcc
tctcccatccttgagctcgctcttacagagactgagccactagaagtggccgagcctgag
gcggaagtcacgcctacagagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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