KEGG   Pseudomonas sp. VLB120: PVLB_14350
Entry
PVLB_14350        CDS       T02897                                 
Symbol
groEL2
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
psv  Pseudomonas sp. VLB120
Pathway
psv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PVLB_14350 (groEL2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psv03019]
    PVLB_14350 (groEL2)
   03110 Chaperones and folding catalysts [BR:psv03110]
    PVLB_14350 (groEL2)
   03029 Mitochondrial biogenesis [BR:psv03029]
    PVLB_14350 (groEL2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psv04147]
    PVLB_14350 (groEL2)
Enzymes [BR:psv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     PVLB_14350 (groEL2)
Messenger RNA biogenesis [BR:psv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PVLB_14350 (groEL2)
Chaperones and folding catalysts [BR:psv03110]
 Heat shock proteins
  HSP60 / Chaperonin
   PVLB_14350 (groEL2)
Mitochondrial biogenesis [BR:psv03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    PVLB_14350 (groEL2)
Exosome [BR:psv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PVLB_14350 (groEL2)
  Exosomal proteins of other body fluids (saliva and urine)
   PVLB_14350 (groEL2)
  Exosomal proteins of breast cancer cells
   PVLB_14350 (groEL2)
  Exosomal proteins of colorectal cancer cells
   PVLB_14350 (groEL2)
  Exosomal proteins of bladder cancer cells
   PVLB_14350 (groEL2)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AGZ35654
Position
complement(3159851..3161470)
AA seq 539 aa
MPHSKMLFRSAAREKILSGATQLADAVRVTLGPKSKSVLMQSSWGKPTVCNDGVTIAKRV
DLQDPEENLGAQMLRQAAERTGEAVGDGTSTATVLAHAILADGVRNVVAGASAIDLKRGL
DRGLALVMTSLLAQSRQVSTAKEKAQVATLSAHNDPLIGQLVADALEKVGVEGVVSVEES
KTTETVVEIMDGMRFDRGYVSPYFVTDTEKMQVELTDACVLLCDHKIGALNDLLPLLEQV
AKSGQPLVVIAEDIDGEALTTLVVNQIRGVLRAVAVKAPGYGDRRKEMLQDIAVLTGATL
VSAELGINLDQLQLSQLGQVHRAVVLKDSTALIGGKGTQQAVATRVAQIRAQIEASTSDY
DREKLHERLARLAGGVAVIRVGAPSEAEMKARKDALDDALAATRAAIAEGMVPGGGLALL
KAVPALLAEEAGSEGDIRTGLQILRRALEAPARMIAENSAVDAGVVVARMLAETGSIGFD
AAANTYVDLYEAGIIDPTKVVRIALENAVSVASILLLTEATMTDIPEKTAPLMQPPLPE
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgccccacagcaaaatgctgttccgctctgcagcgcgggagaaaattctcagtggcgcc
acccagctcgccgatgccgtgcgcgttacgctagggcccaaatcgaaatcggtgctgatg
cagagcagttggggtaagccgaccgtctgcaacgatggagtcaccatcgccaaacgggtc
gatctgcaggacccagaggaaaatcttggcgcccagatgctgcgccaggcggccgaacgc
accggtgaagcggtgggggatggcaccagtaccgcgacagtgctcgcccacgcgatcctg
gccgacggcgtgcgcaacgtggtggccggggccagcgccatcgacctcaagcgaggcctg
gacagagggctggcgttggtcatgacatcgctgctggcgcagtcacgccaggtcagcact
gccaaggaaaaagcccaggtggcgacgttatcggcgcacaacgacccgttgattggccag
ttggtcgcggatgccctggagaaggtcggcgtggaaggcgtggtcagcgtggaggaatcc
aagaccaccgaaaccgtggtcgaaatcatggatggcatgcgcttcgaccggggctatgtg
tcgccttacttcgtcaccgacaccgagaagatgcaggtcgagctgaccgatgcttgtgtc
ttgctgtgcgatcacaagatcggcgcactcaacgatctgctgcccctgctggaacaagtg
gcgaaaagcggtcagccgctggtggtgatcgccgaagacatcgacggcgaggccttgacc
acgctggtggtcaaccagatccgcggcgtgctgcgagcggtggccgtgaaggctcctggg
tatggcgaccggcgcaaggaaatgctccaggacatcgcggtgctcacgggggcgaccctg
gtgtcggcggagcttggcatcaatctcgatcagttgcagttgtcccagctcggccaggtg
caccgtgcggtggtgttgaaagacagtacggcgttgatcggtggcaagggcacccagcaa
gcggtggctacccgcgttgcgcagatccgcgcccagatcgaggccagcaccagcgattac
gaccgggaaaaactgcatgaacgcctggccaggcttgcgggcggtgtggcagtgatccgc
gtcggggcaccgtccgaagcggagatgaaagcgcgcaaggacgcgttggatgatgccctg
gccgccacccgcgcggccatcgccgaaggcatggtgcctggcggtggcctggctttgctc
aaggcggtgcctgcgttgctcgctgaagaggcgggcagcgaaggtgatatacgcaccggt
ttgcagatactgcgccgtgcgctggaggccccagcgcggatgattgccgaaaattccgcg
gtggacgcgggcgtggtggtggcacgcatgctcgccgaaacgggcagcatcgggttcgac
gcggcggccaacacctacgtcgacctgtacgaggccggcatcatcgaccccaccaaagtg
gtacgcatcgccctcgagaacgcagtctcagtcgccagcatcctgctgctgaccgaggca
accatgaccgatatcccggaaaagacagcacctttgatgcaacccccattgcctgagtga

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