KEGG T03282: DR96

Providencia stuartii ATCC 33672: DR96_3240

Entry

DR96_3240         CDS       T03282

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

psx Providencia stuartii ATCC 33672

Brite

KEGG Orthology (KO) [BR:psx00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psx03032]
    DR96_3240 (topA)
   03400 DNA repair and recombination proteins [BR:psx03400]
    DR96_3240 (topA)
Enzymes [BR:psx01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     DR96_3240 (topA)
DNA replication proteins [BR:psx03032]
Prokaryotic type
  DNA Topoisomerases
   DR96_3240 (topA)
DNA repair and recombination proteins [BR:psx03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DR96_3240 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom Zn_ribbon_recom DUF2399 GSG-1 CEP104_ZnF zf-TFIIB

Other DBs

NCBI-ProteinID:

AIN63934

Position

complement(3501876..3504470)

AA seq 864 aa
MGKALVIVESPAKAKTINKYLGSGYVVKSSVGHIRDLPKSGSGSQKSTGSSTDKTKKVKK
DPQAALVKRMGVDPYHGWKANYQILPGKEKVVSELQALAADADHVYLATDLDREGEAIAW
HLREVIGGEDSRFSRVVFNEITKNAITQAFDSPGELNIDRVNAQQARRFMDRVVGYMVSP
LLWKKVARGLSAGRVQSVAVRLIVEREREIKAFVPEEYWELHADLADKSTAALRMQVTHQ
LGKAFKPVTKAQTDAAVSLLEKALFQVIDREDRPTSSKPSAPFITSTLQQAASTRLGFGV
KKTMMMAQRLYEAGYITYMRTDSTNLSQDALNMVRGYISDNFGEKYLPKDANIYTSKDNS
QEAHEAIRPSSVDVLPDALKDMESDAKKLYQLIWNQFVACQMTPAKYDSTTLTVKAGDFE
LKAKGRTLRFDGWTRVMPALRKNDEDKTLPPIQVGSELSLVELLPSQHFTKPPARFSEAS
LVKELEKRGIGRPSTYAAIISTIQDRGYVKVENRRFYAEKMGEIVTDRLEENFNDLMNYD
FTARMEDQLDHIANHEAEWKAVLDEFFSDFSKQLDIAERDPEEGGMRTNPMVITSITCPD
CERHMGIRTASTGVFLGCEGYALPPKERCKKTINLIPEHEVLNILEGDDAETNALRAKRR
CPKCGTAMDSYLIDNQRKLHVCGNNPACEGYEIEEGEFRIKGYDGPVIECDKCGSEMHLK
TGRFGPYMGCTNEECKNTRKILKNGEIAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFL
AANTFPKSRETRAPLVEELQRFRDRLPEKLVYLADAPAKDPDGNPTVVRFSRKTKQQYVS
SEKNGKATGWSAFFVDGKWEVKEK

NT seq 2595 nt +upstreamnt +downstreamnt
atgggtaaagctcttgttatcgtggagtccccggcaaaagccaaaacgatcaataagtat
cttggcagtggctacgttgtaaaaagcagcgttggccacattcgcgatctgccgaaaagc
gggtccggctcacaaaagagtacaggctcatctaccgacaaaactaaaaaggttaaaaaa
gatcctcaagccgcgcttgtgaagcgtatgggggtcgatccttaccatggttggaaagca
aactatcagatcttaccgggtaaggaaaaggtggtttctgaattacaagctttagcggca
gatgcagaccatgtctatcttgcgacggaccttgaccgcgaaggggaagctattgcatgg
cacttacgcgaagtgattggtggtgaagactctcgctttagccgtgttgtgtttaacgaa
attactaaaaatgcgatcactcaggcgtttgatagccctggcgaactcaatatcgataga
gttaatgctcaacaagctcgccgtttcatggatcgcgtagtaggttatatggtatcgccg
ctgttatggaaaaaagtggcgagagggttatctgcaggtcgcgtacaatccgttgcggta
cgtttgattgtcgaacgtgaacgtgaaattaaagcgtttgtgccggaagaatattgggaa
cttcatgcggatttggcggataaaagtacggctgcattacgtatgcaggttacgcatcaa
ttaggcaaagcgttcaagccagtcactaaggcgcaaactgacgctgcggtgagtttgcta
gaaaaagcactcttccaagtgattgaccgtgaagaccgacccacatccagcaagccgagt
gcgccttttatcacatcaacgctgcaacaagccgctagcacccgtcttgggtttggtgtg
aagaagaccatgatgatggctcagcgcctttatgaagcgggttatattacctatatgcgt
actgactcaactaacttgagccaagatgcattaaatatggtacgtggctatattagcgat
aattttggcgaaaaatatctgcctaaagacgccaatatttacactagcaaagataattcg
caagaagcgcacgaagctatccgtccttccagtgttgatgttctacccgatgcactgaaa
gatatggaatcagatgcgaaaaagctctatcagttaatttggaatcaatttgtggcatgt
caaatgacgcctgcaaaatatgattcaacaacattaacggtgaaagcaggggattttgag
ctaaaagcgaaaggccgtacattgcgtttcgatggttggacgcgagtgatgcctgcactg
cgcaaaaatgatgaagacaaaacattgccaccaatccaagtaggctctgaattgtcgctg
gttgaattgttgccaagtcagcactttacgaaaccaccagcacgttttagcgaagcctcc
ttagttaaggagcttgagaagcgcggtattggtcgtccatcaacctatgcggcaattatc
tctacgatccaagatagaggttacgttaaggttgagaaccgtcgtttttatgcggagaaa
atgggtgagatcgtgacagataggttggaagaaaacttcaatgacctaatgaactatgat
tttactgcacgcatggaagatcagcttgaccatattgctaatcacgaagcagagtggaaa
gcggtgcttgatgaatttttctctgattttagcaaacagctagatattgcagagagagat
cctgaagaaggtggaatgcgcacgaaccctatggtgatcacttcaattacttgtcctgat
tgtgaacgtcatatggggatccgtacagcttcaacaggggtgttcctcggttgtgaaggc
tatgcgttaccaccaaaagagcgctgcaaaaaaaccatcaatttgatccctgaacatgaa
gtattgaatattcttgagggggatgatgcggaaaccaacgcgctgcgtgctaagcgtcgc
tgtccaaaatgcggtacagcaatggatagctacctgattgataatcaacgcaaactgcat
gtgtgtggtaacaacccagcttgtgaaggttatgagattgaagagggtgagttccgcatt
aagggttatgacggcccagtaattgagtgtgataaatgcggttcagaaatgcacctaaaa
acagggcgctttgggccttatatggggtgcacaaatgaagagtgtaaaaacacccgtaag
atcttaaaaaatggtgagattgctccaccaaaagaggatccggtaccattacctgaatta
ccttgcgaaaaatcagatgcgtattttgtgttgcgcgatggtgcggctggcgtattccta
gcggcaaacaccttcccgaaatcacgagaaacgcgagcgccattggttgaggagttgcaa
cgctttagagatagactacctgaaaagctggtttatttagctgacgcgcctgcaaaagat
cctgatggtaatccaaccgttgtgcgttttagccgtaagacgaaacagcaatatgtttct
tcagagaaaaatggcaaagccacaggttggagtgcattttttgtagacggcaaatgggaa
gtgaaagagaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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