KEGG   Providencia stuartii ATCC 33672: DR96_732
Entry
DR96_732          CDS       T03282                                 
Symbol
deaD
Name
(GenBank) cold-shock DEAD box protein A
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
psx  Providencia stuartii ATCC 33672
Pathway
psx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DR96_732 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psx03019]
    DR96_732 (deaD)
   03009 Ribosome biogenesis [BR:psx03009]
    DR96_732 (deaD)
Enzymes [BR:psx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DR96_732 (deaD)
Messenger RNA biogenesis [BR:psx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DR96_732 (deaD)
Ribosome biogenesis [BR:psx03009]
 Prokaryotic type
  rRNA helicases
   DR96_732 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 DRTGG AAA_22
Other DBs
NCBI-ProteinID: AIN63721
Position
complement(800981..802849)
AA seq 622 aa
MTTETDISFADLGLSASILTALNDLGYEKPSPIQKQCIPLLMDGNDVLGMAQTGSGKTAA
FSLPLLHNIDPDLKAPQILVLAPTRELAVQVAEAMGDFSKHMSRVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLRMGFIEDVENIMSQIPA
EHQTALFSATMPEPIRRITRRFMKEPKEIRIQASITTRPDIAQSYWTVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPDSQLLSERRQAKFAEKIQQQFESSDLDQYRALLKKLSPSEDVDME
TLAAALLKMAQGERALILPPDAPRRPRREFNDRDDRRRDRNGNGFDRAERGDRSGRRERR
DVGDMEMYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFGSHSTIELPKGMPTEV
LTHLSRARILNKPMQMQLIGDAQPFERRERRGGSRRDGGFNGERRNDREGGNRRGGHRGN
GRGRNEDHNSAAPRRRSTSHNA
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgaccaccgagactgatatctctttcgctgatttaggtttatcagcgtctattttgact
gcactaaacgacctgggatatgaaaaaccttctccgatccaaaaacaatgtattccattg
ttaatggacggtaatgatgtgttgggtatggcacagacagggagcggtaaaaccgcagcc
tttagtctgccgctactgcacaacattgatccagatttaaaagctccgcaaattctagtc
ctagccccaacacgtgagttggcggttcaggttgctgaagcgatgggcgatttttctaaa
cacatgagccgtgttaacgtggtggccctatatggtggccagcgttacgacgtgcaattg
cgtgctttgcgccaagggccacaagttgttgtgggaacgcctgggcgtctgcttgatcat
ctgaaacgcggtacattagacctgtctaaattgaaaggcttagtactggatgaagctgat
gaaatgctgcgtatgggctttattgaagatgttgaaaacatcatgagccaaattccagca
gagcatcaaacagcgctgttttcagcgacgatgccagaaccaattcgtcgtataacacgc
cgtttcatgaaagagcctaaagaaattcgtattcaggctagcattacaacacgtccagat
attgctcaaagctattggactgtttacggcatgcgcaaaaatgaggctctggttcgtttc
ttagaagccgaagattttgacgcagcaattatttttgttcgtacaaagaatgcaacgctg
gaagtggcagaagcgcttgagcgcaacggttataacagtgctgcattgaacggtgatatg
aaccaagcgttacgtgaacaaacgctagaacgtttaaaagacggtcgtttggatattttg
atcgccactgacgttgctgctcgtggtcttgatgttgaccgtattagcttagtcgttaac
tatgacatcccaatggatgcagagtcttatgttcaccgtatcggtcgtactggccgtgca
gggcgtgctggccgtgcactcttgttcgtagagaaccgtgagcgtcgtttgctgcgtaac
gttgaacgcaccatgaagctaacgatccctgaagttgaactgccagattcacaattgcta
agtgaacgtcgtcaggcgaaatttgctgaaaaaatccaacagcaatttgaaagcagtgac
ttagaccaataccgcgcgctgttaaagaaactgtcaccgtcagaagatgttgatatggaa
acattggccgccgcgttgctaaaaatggctcaaggtgagcgtgcacttattctgccacca
gatgcaccgcgtcgcccacgtcgtgaattcaatgaccgtgatgatcgccgtcgtgatcgt
aatggcaatggctttgaccgtgcagagcgtggtgatcgtagtggtcgtcgtgagcgccgt
gatgttggcgatatggaaatgtatcgcatcgaagtcggccgtgatgatggcgtagaagtg
cgccacattgtaggggcgattgccaatgaagcggatattagcagccgttatattggtaat
atcaagctgtttggctctcactcaacgattgagctaccaaaaggcatgccaaccgaagtg
ttaactcacttaagccgtgcacgcattttgaataaaccaatgcaaatgcaattaattggt
gatgcacagccgtttgaacgtcgtgagcgtcgtggtggttcacgccgtgacggtggcttt
aatggtgagcgtcgcaacgaccgtgagggtggcaatcgtcgcggtggccatcgtggtaac
ggacgtggtcgtaatgaagatcacaactcggcagctccgcgccgccgtagcaccagccat
aatgcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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