KEGG   Psychromonas sp. CNPT3: PCNPT3_00350Help
Entry
PCNPT3_00350      CDS       T02515                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
psy  Psychromonas sp. CNPT3
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:psy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PCNPT3_00350
Enzymes [BR:psy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PCNPT3_00350
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PCNPT3_00350
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(92614..93426)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGLSKYILAKKITRIDIRQRQLRWEIPTDLSVHLVQKELLSIDRRAKYL
LLNFNSGTLLIHLGMSGSLRVCNLNTPPEKHDHADFIFDSCLLRYTDPRRFGAILWLGSD
PYAHKLLSHLGVEPLTEQFSGEYLHHLSKRRKLPVKQFIMDQKVVTGVGNIYATEALFLS
ALRPTRSASQISLARYQRLVLEIKKVLILAIEQGGTTLKDFVGGDGKPGYFQQTLHIYGK
AGAPCPSCQKPLDAIKLAGRNSVFCAHCQT
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgaattgccagaagttgaaacgacacgccgtggccttagcaaatatattcttgct
aaaaaaataactcgtattgatatccgccaaaggcaattacgttgggagatcccaacggat
ctaagcgttcacctagtgcaaaaagaactattatccattgatcgacgtgctaagtatttg
ttacttaactttaactccggcacgttattaatacatcttggtatgtcgggtagtttacgc
gtttgtaatttaaacacgccccctgaaaaacacgatcatgccgactttatctttgattct
tgcctattgcgttataccgacccgagacgttttggtgctattttatggctaggctctgat
ccttatgcacacaagttactcagccatcttggcgtagagcctttaacggaacagttcagc
ggagaatatctacatcacctgagtaaacgacgaaaactgcccgttaaacaatttattatg
gatcaaaaggtggtaaccggtgtcggtaatatttatgcaaccgaagcgctttttttaagt
gcgcttcggcccacacgtagtgccagtcagatatctctcgcacgttatcagcgattggtt
ttagaaataaaaaaagtgttaatactggcaatcgagcaaggtggcaccaccttaaaagat
tttgtcggtggagatgggaaaccgggatattttcaacaaaccttacatatttatggaaaa
gcaggagcgccttgtccctcttgtcaaaaacctttagatgccatcaagctcgcgggacgc
aatagcgtgttttgtgcacactgccaaacataa

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