KEGG   Psychrobacter sp. DAB_AL43B: DABAL43B_0366
Entry
DABAL43B_0366     CDS       T04748                                 
Symbol
ymfC
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
psyc  Psychrobacter sp. DAB_AL43B
Brite
KEGG Orthology (KO) [BR:psyc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psyc03009]
    DABAL43B_0366 (ymfC)
Enzymes [BR:psyc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     DABAL43B_0366 (ymfC)
Ribosome biogenesis [BR:psyc03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DABAL43B_0366 (ymfC)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: SLJ83581
UniProt: A0A1U6GJA4
Position
I:complement(422803..423429)
AA seq 208 aa
MSSSSLILFNKPYGVQSQFRDDSNNDHTTLSEYFTDKSLRIAGRLDATSEGLLILTSDGR
INKAITQPPSAKNFAQNKLKQGKTYLVQVEGVATAAQLNELASGVVLKDGKTLPASAVLV
AEAELPMTLWQRDPPIRERKNIPTSWLMLTIYEGKNRQVRRMTAHVGLPCLRLIRWSVAG
FELGELGVGEFVRIHLNSGHCQQLGILD
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtccagctctagccttattttatttaacaaaccttacggagtacaaagccaattccgt
gatgacagcaataatgaccacaccaccctatcagaatattttacggacaaatctcttaga
atcgctggtcggcttgatgcaacctcagaagggctactgattttgaccagcgatggacga
attaataaggccattactcaaccaccatctgctaagaattttgcgcaaaacaaactaaaa
caaggcaagacttatttggtacaagtggaaggtgtggcaactgctgcgcagctaaacgag
ctggcatctggggttgtattaaaagatgggaaaaccttgccagcatccgctgtgttggtc
gctgaagcagaattacctatgacattatggcaacgcgatccgcccattcgtgagcgtaaa
aacataccgacgtcatggttgatgctcactatatatgaaggtaaaaatcgccaagttagg
cggatgacggcgcatgtagggctaccttgtctgcgcctgattcgctggtcagttgcaggg
tttgagcttggggaactgggcgttggcgagtttgtgcgtattcacctaaatagcggacat
tgtcagcaattaggcattttagattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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