KEGG   Psychrobacter sp. DAB_AL43B: DABAL43B_0522
Entry
DABAL43B_0522     CDS       T04748                                 
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
psyc  Psychrobacter sp. DAB_AL43B
Pathway
psyc00270  Cysteine and methionine metabolism
psyc00450  Selenocompound metabolism
psyc00670  One carbon pool by folate
psyc01100  Metabolic pathways
psyc01110  Biosynthesis of secondary metabolites
psyc01230  Biosynthesis of amino acids
psyc04980  Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:psyc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    DABAL43B_0522 (metH)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    DABAL43B_0522 (metH)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    DABAL43B_0522 (metH)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    DABAL43B_0522 (metH)
Enzymes [BR:psyc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     DABAL43B_0522 (metH)
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding ComA SPICE
Other DBs
NCBI-ProteinID: SLJ83732
UniProt: A0A1U6GJP0
Position
I:complement(619746..623657)
AA seq 1303 aa
MDLQLFSFNVFTAFLYLLFYNIDNISSVPMTSMTSPQTSITVSSDTPAVDNGNPNANPND
FILTPPEVFPYKAQQLTARARITEQMALRILMLDGAMGTHIQNYKLEEADYRGERFANIK
QDVRGNNDLLVLSQPHMIKEIHLAHLEAGADIIETNSFNGTRLSMADYDMQYLVPELNKT
AAKIAREAADEFTAKTPNKPRFVAGVIGPTSRTCSLSPDVNDPAFRNITFDELVLNYREA
TLALMEGGVDLILIETIFDTLNAKAAIFAVTGVFDDIGFELPIMISGTITDASGRTLSGQ
TAEAFYNSIRHAKPLTVGFNCALGADALRPHIQTLSNIANTYVSAHPNAGLPNEFGEYDE
SAKETTALLEGFAKAGILNIVGGCCGTTPEHIRQIANMVANYPPRVIPEIAPACRLSGLE
PFTITPDSLFVNVGERTNVTGSKKFLRLIKTEAYLEALDVARDQVEGGAQIVDINMDEGM
LDSKQAMIHFVNLVSGEPDISRVPLMIDSSKWDIIEEGLKRIQGKSIVNSISLKEGHAEF
VERAKLCMRYGAAIIVMAFDEDGQADTFERKTQICKRSYDVLVNEVGFPSEDIIFDPNIF
AVATGITEHNNYGADFINATKWITENLPNAMVSGGVSNVSFSFRGNPIREAINSVFLYHA
IQNGLTMGIVNPAMLELYDDIPKEARDAIEDVMLNRNQGETGQDATERLMTIAESYQDGG
KKKDSTVDMTWREGTVEERIAHALVKGITTFIEADTKEAWEKYPRPLEVIEGPLMDGMNI
VGDLFGAGKMFLPQVVKSARVMKQSVAWLNPYIEAEKVEGEKKGKILMATVKGDVHDIGK
NIVGVVLGCNGYDIVDLGVMVPCEKILDTAIAEEVDIIGLSGLITPSLDEMVYVAKQMQE
RGITLPLMIGGATTSKAHTAVKVEPQYQNNGVIYVADASRSVGVVTKLLSKEHRQGLIDE
TRAEYIKVRERLAKRQPKAAKISYAESIDIGFKDDWDNYVPPTPNKLGQVILDDYPITNL
LPYIDWTPFFISWGLAGKYPRILQDDVVGEAARDLFDNANELMQKMIDEKLIVAKGVFKL
MPARRTGADTVTVYDNDPQQGGNPTYQFEHLRQQSDKASGKPNFSLADFISPSETHTDYL
GGFTVSIVGTEALAEKYKAAGDDYNAIMTQALSDRLAEAFAEHLHELIRKEYWGYQADEN
LTNDEMIKEKYVGIRPAPGYPACPEHTEKGKLFEWIGTGDAIGTILTESYAMWPASSVSG
FYYSHPDSEYFNVGKISTDQLESYAERKGWDMKTAEKWLNPNL
NT seq 3912 nt   +upstreamnt  +downstreamnt
atggatttgcaacttttttcttttaatgtttttaccgcgtttctttatctcctcttttat
aatattgataatataagcagtgttcctatgacctcgatgacctctcctcaaaccagtatc
accgtatcttctgacacgccagctgtcgacaatggcaacccaaatgccaatcctaacgat
ttcatattgacaccgcctgaggtgttcccttataaagcacagcagttgacagcacgcgca
cgtatcacggaacagatggcgttacgaattttgatgcttgatggtgcgatgggaacgcat
attcagaattataagcttgaggaagcagactatcgcggagagcgttttgctaatattaag
caagatgtacgcggcaataatgacctgctggtactctcacagccacatatgattaaagag
attcaccttgctcaccttgaggcgggcgctgatattatcgaaaccaacagctttaacggt
acgcgtctgtcgatggccgactatgatatgcaatatctagttcctgagctaaataaaacc
gctgccaagattgctcgcgaagccgctgatgagttcactgctaagacacctaataagcca
cgtttcgtcgctggagttattggaccaacgtcgcgtacttgctcgctatcgcctgatgtt
aatgatcctgcctttcgtaatatcacctttgatgaattggtgctgaattatcgtgaagcg
acattggcattgatggaaggtggcgtcgatctcattttgattgagacgattttcgatacg
ctaaatgccaaagcagcgatttttgctgtcacaggcgtctttgatgatatcggatttgaa
ttacctattatgatttcagggacgattaccgatgcgtcgggtcgtactttatcgggtcaa
acggctgaagctttttataactctattcgccatgcgaagccattaacggttggctttaac
tgtgcacttggtgctgatgcccttagaccgcatattcaaacactgtcaaatatcgccaac
acttatgtatcagcacatccaaatgcgggcttgcccaatgagtttggcgaatacgatgaa
tccgccaaggaaactacggcactgcttgaaggctttgccaaagcaggcattctaaatatc
gtcggcggctgctgcggtacaacgcctgagcatattcgccaaatcgctaacatggtggca
aattatccaccgcgcgtcattcctgagattgcgccagcttgccgcttatctggacttgag
ccatttaccattacgcctgatagcttattcgtcaacgtcggtgagcgtaccaacgttacc
ggttcaaagaaattcttgcgtttgattaaaaccgaagcttatcttgaggcgctcgatgtc
gcccgtgaccaagtcgaaggcggcgcacaaatcgtcgatatcaacatggacgaaggcatg
cttgactccaaacaagcgatgattcatttcgtcaacttggtatcgggcgagccggacatt
agccgcgtacccttgatgattgactcctcaaaatgggacattatcgaagaaggtttgaag
cgcattcaaggtaagtctatcgtcaactctatctcgttaaaagaaggtcacgctgagttc
gtcgagcgcgcaaagttatgcatgcgctatggtgctgctattattgtcatggcatttgat
gaagatggacaagccgatacctttgagcgcaaaactcagatttgtaagcgcagctatgac
gtattggttaatgaagtaggtttcccgtctgaagatattatctttgaccccaatatcttt
gccgtggccaccggtattactgagcacaacaactacggtgccgactttatcaacgcgact
aaatggattacggaaaacttgccgaatgccatggtatcgggcggcgtatcgaacgtctca
tttagtttccgtggtaaccctatccgtgaagccatcaactccgtattcctttatcatgcg
attcaaaatggcttgacgatgggtatcgttaaccctgccatgcttgagttatatgacgat
attcctaaagaagcacgcgatgccatcgaagatgtgatgcttaaccgcaatcaaggcgag
actggtcaagatgccaccgaacggctaatgaccatcgctgagagctatcaggacggcggt
aagaaaaaagacagcaccgtcgacatgacttggcgcgaaggcacagtagaagagcgcatt
gcccatgcgttagtaaaaggtatcactacctttattgaagccgataccaaagaagcgtgg
gagaaatatcctagaccactagaggtcatcgaagggccactgatggacggtatgaatatc
gttggtgatttatttggtgccggtaaaatgtttttaccgcaagtagtcaaatccgctcgc
gtcatgaagcagtctgtcgcgtggctcaacccgtacatcgaagcggaaaaagtcgagggt
gaaaagaaaggcaaaatcctcatggcaaccgtcaaaggtgacgtccatgatatcggtaaa
aatatcgtcggcgtggtgcttggctgtaacggttatgacattgttgatttgggcgtgatg
gtaccctgtgaaaaaatcctcgataccgcaattgctgaggaagttgatatcattggtcta
tcaggtttgattactccaagtcttgatgaaatggtctatgtcgccaaacaaatgcaagaa
cgcggtataacgctgcccttgatgattggcggtgcaacgacctctaaagcacatacggcg
gtcaaagttgagccgcaataccaaaacaatggcgtcatatacgtggcagatgcgtcgcgc
tcagtcggcgtagtgacgaagctgctatcaaaagagcaccgtcaaggtttgatcgatgaa
acccgcgcagaatatataaaagtgcgtgagcgcctcgccaagcgtcaaccaaaagccgcc
aagatatcctatgcggaatcaatcgacattggctttaaagatgactgggacaactatgtg
ccgccgactcctaataagctaggacaagttatccttgatgattatcccatcaccaatcta
ctgccttatatcgactggacaccgttctttatctcttggggtctggcaggtaaatatcca
agaatattacaagacgatgtagttggtgaagcagcgcgtgatttgttcgataatgctaat
gaattgatgcaaaagatgattgatgagaaattaatcgtcgcgaaaggtgtattcaaactg
atgccagcacgtcgtactggtgcggatactgtcaccgtttatgataacgatccacagcaa
ggtggcaacccaacctatcagtttgagcatttacgtcaacaaagtgacaaagccagtggt
aagccaaactttagcttagcagactttatctcaccatcggaaacgcatactgactattta
ggtggctttacagtctcaatagttggtacagaagcactcgctgaaaaatataaagccgct
ggtgatgactataatgccattatgactcaagccttgtctgaccgtttagcagaagccttt
gccgagcatctacatgagctgattcgtaaagagtattggggctatcaggctgacgaaaac
ctaaccaatgatgagatgattaaagaaaaatacgtcggtatccgtccagcacctggctac
cctgcctgccctgagcataccgaaaaaggtaagctatttgaatggattggtacaggcgat
gctatcggtactatcttgaccgaaagctatgcgatgtggcctgcgtcttcggttagtggc
ttttactactcgcatcctgatagtgaatacttcaacgtcggtaaaatcagcaccgatcag
ttagagagttatgctgagcgtaaaggctgggatatgaagactgctgagaagtggttgaat
ccgaatttgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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