KEGG   Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_0580
Entry
PSTAB_0580        CDS       T01571                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
psz  Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PSTAB_0580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psz03021]
    PSTAB_0580
   03019 Messenger RNA biogenesis [BR:psz03019]
    PSTAB_0580
Transcription machinery [BR:psz03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     PSTAB_0580
Messenger RNA biogenesis [BR:psz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PSTAB_0580
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 AAA_22 NACHT AAA
Other DBs
NCBI-ProteinID: AEJ03861
UniProt: A0A4P1SA00
Position
630198..631457
AA seq 419 aa
MNLTELKQKPITELLEMAEQMGIDNMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDSIN
YDRPENAKNKILFENLTPLFPNERLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNLELQLDRRIAEKRVFPAINI
NRSGTRREELLTAEDELQRIWILRKLLHPMDEIAAIEFLLDKLKDTKTNDEFFMSMKRK
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatctgactgaactcaagcaaaagcccatcaccgaactgctggaaatggccgaacag
atgggcatcgacaacatggcccgttcgcgcaagcaggacgtgattttctccctgctgaaa
aagcacgcgaaaagcggcgaggaaatctccggtgacggcgtgctggagattctccaggac
ggtttcggcttcctgcgctccgcggattcttcctatctggccggcccggacgacatctat
gtgtcgcccagccagatccgtcgcttcaacctgcgtaccggcgacaccatcgtcggcaag
atccgcccgccgaaggaaggcgagcgctacttcgccctgctcaaggtcgactcgatcaac
tacgatcggccggaaaacgcgaagaacaagattctcttcgagaacctgaccccgctgttc
cccaacgagcgcctgaagatggaggccggcaacggctccaccgaagacctcaccggtcgc
gtgatcgacctctgcgcaccgatcggcaagggtcagcgcggcctgatcgtcgccccgccg
aaggcgggcaagacgatcatgctgcagaacatcgccagcaacatcacccgcaacaatccc
gagtgccacctgatcgtcctgttgatcgacgagcgcccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggtggcctccacctttgacgagccgccgacccgccacgtg
caggtcgctgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggatgtg
gtcatcctgctcgactccatcactcgcctggcgcgtgcctacaacaccgtgatcccgagc
tccggcaaggtactcaccggtggtgtcgacgcccacgcgctggagaagcccaagcgtttc
ttcggcgccgcgcgcaacatcgaggagggcggctcgctgaccatcctcgccaccgcgctg
gtggaaaccggctcgaagatggacgaggtgatctacgaggaattcaagggcaccggtaac
ctggagctgcaactggaccgccgcatcgctgaaaagcgtgtgttcccggccatcaacatc
aaccgctccggcacccgccgcgaggagttgctgaccgccgaggacgagctgcagcgcatc
tggatcctgcgcaagctgctgcatccgatggacgagatcgccgccatcgagttcctgctc
gacaagctcaaggacaccaagaccaacgacgaattcttcatgtccatgaagcgcaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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