KEGG T01571: PSTAB

Pseudomonas stutzeri ATCC 17588: PSTAB_2643

Entry

PSTAB_2643 CDS T01571

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

psz Pseudomonas stutzeri ATCC 17588

Pathway

psz03410	Base excision repair
psz03420	Nucleotide excision repair
psz03430	Mismatch repair
psz03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:psz03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:psz03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:psz03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:psz03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

339494720

NCBI-GeneID:

10943686

UniProt:

F8H3X5

Position

2838395..2840101

AA seq 568 aa
MKAFATLYSRLDATTSSNAKLAAMRDYFREADPADAAWAVYFLAGGRPRQLVPTRVLRET
AMQAAGLPEWLFEESYQAVGDMAETISLLMPEAEHSSEDGLAVWMQDRLLPLRGLPPEEL
AERLPALWAQLDRLSLMVCIKLITGAFRVGVSKLLVTRALASLADLDPKRVAQRLVGYTD
LSHRPSAEGYRALIAEESEHEHAQRGGQPYPFFLAHALQAPVDTFDTLLGAPDNWFIEWK
WDGIRAQLVKRDGQIWVWSRGEELVSERFPELCELARCLPDGTVIDGEILVWKHAPETLA
GELFDDASTGEPSADGFGVQPFALLQQRIGRKNLTAKVLQDAPVAVLAYDLLEWQGDDWR
QREHRERRQQLEAVVGQCPSPQLMLSPLVSGADWQDLARQREASRQLGVEGMMIKARAAQ
YGVGRTKDVGVWWKWKIDPYSVDAVLIYAQRGHGRRASLYTDYTFAVWDGEPGDPERKLV
PFAKAYSGLTDEEMRKVDAIVRKTTVEKFGPVRSVTPTLVFELGFEGIAASSRHKSGIAV
RFPRMLRWRLDKPVDEADTLETLKELLG

NT seq 1707 nt +upstreamnt +downstreamnt
atgaaagccttcgccacgctctacagccgcctggacgccaccacgtcgagcaatgccaaa
ctggccgcgatgcgcgactattttcgcgaggccgatccggccgacgctgcctgggcggtc
tacttcctggccggcggtcgcccgcgtcaactggtcccgacccgcgtcctgcgcgaaacc
gccatgcaggcggcgggcctgcccgaatggctgttcgaggaaagctaccaggcggtcggc
gacatggccgagaccatctcgctgctgatgcccgaggccgaacacagctccgaggacggg
ctggccgtgtggatgcaggaccgactgctaccgctgcgcggcctgccgccggaggagctg
gccgaacgcttgccggcgctctgggcacagctggaccggctcagcctgatggtctgcatc
aagctgatcaccggcgcctttcgcgtcggcgtctcgaagctgctggtcacccgcgcgctg
gcctcgctggccgacctcgaccccaagcgtgtcgcgcagcgcctggtcggctacaccgac
ctgtcccaccgacccagcgccgagggctatcgcgcgctgatcgccgaagaatccgagcat
gagcatgcccagcgcggtggccagccctacccgttctttctcgctcatgcgctgcaggcc
ccggtggacacgttcgacacactgcttggcgcgccggacaactggttcatcgaatggaag
tgggatggcatccgcgcccagctggtcaagcgcgacgggcagatctgggtctggtcgcgc
ggtgaggagctggtcagcgagcgttttcccgagctgtgcgaactggcccgctgcctgccc
gacggcacggtgatcgatggcgagatcctggtctggaagcatgccccggagaccctggcc
ggcgagctgttcgacgacgccagcaccggcgagcccagcgccgatggcttcggcgtgcag
cccttcgccctgctgcagcagcgcatcggccgcaagaacctgaccgccaaggtcctgcag
gatgccccggtcgcagtactcgcctacgacctgctggaatggcagggcgacgactggcgg
cagcgcgagcaccgcgaacgccgccagcagctcgaggcggtcgtgggccaatgcccgagc
ccgcagctgatgctttcaccactcgtaagcggagcggattggcaggacctggcccgccag
cgcgaagcctcccgccagctgggcgtggaaggcatgatgatcaaggcgcgcgcggcccag
tacggcgtcggccggaccaaggacgtcggcgtctggtggaaatggaagatcgacccctac
tccgtcgatgccgtgctgatctatgcccagcgcggtcatggccgccgcgccagcctttat
accgactacacctttgccgtctgggacggcgagccgggcgaccctgagcgcaagctcgtc
cccttcgccaaggcctattccggcctcaccgacgaggaaatgcgcaaggtcgacgccatc
gtgcgcaagaccaccgtggagaagttcggcccggtgcgcagcgtcaccccgaccctggtg
ttcgaactcggcttcgaaggcatcgccgccagcagccgccacaagagcggcatcgccgtg
cgcttcccacgcatgctgcgctggcggctcgacaagccggttgacgaagccgatacgctg
gagacgctgaaggaactgctgggatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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