KEGG T01571: PSTAB

Pseudomonas stutzeri ATCC 17588: PSTAB_3993

Entry

PSTAB_3993 CDS T01571

Gene name

recD

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

psz Pseudomonas stutzeri ATCC 17588

Pathway

psz03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:psz03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 Helicase_RecD UvrD-helicase AAA_22 DUF2075 AAA_16 AAA_25 T2SE AAA_28 DUF87 CbiA Flavi_DEAD AAA_5 KaiC TrwB_AAD_bind

Other DBs

NCBI-GI:

339496070

NCBI-GeneID:

10945036

UniProt:

F8H5R8

Position

complement(4312111..4313961)

AA seq 616 aa
MTLADLPLGPLERAFVASLQRLEPQAPEAVLLAATLCCEALAAGDVCLPLERLAGRRPWP
DVDLSMPALPVWHAQLEASTLVGTPDDYAPLTLVGDRLYLARYQAYEQQLAEQLLARTGD
APEVDEARLAESLARLFAFNQQRPDWQRLAAAQAVRRRLAVISGGPGTGKTTTVVRLLAA
LLEQPGGERLAIGLAAPTGKAAARMAEAIRNAKAELPVSDAVKEALPDEARTLHRLLGSR
GDSPRVRHDAANPLALDVLVVDEASMVDLALMAKLVVALPPKARLILLGDKDQLAAVEAG
AVFAELCEGRGFDAGAASELERITGQPVPVETPRSRLGDAVVLLTHSHRFAGDSGIGELA
RRINAGDAKGTVALLQEGRADLAWNATPGATALIERLEQGYGGYLQAARQGDPGPAFEAF
NGFRALTAQREGPFGVTGINEALETRFRRRLGVPARERWYPGRAVMVRQNDYALGLFNGD
IGLCLKTEQGLRVFFEGDNGYRGFAPARLPSHDSAFAMTVHKSQGSEFTEVLLALPDQPS
PLLTRALFYTGITRAKRRVEIWALPARLAEAVSTRAERAAGLAERLVLAGAVADADAVPE
APIGAAPAEGDQLSLF

NT seq 1851 nt +upstreamnt +downstreamnt
atgacccttgccgatctgcccctcggcccgctggagcgcgcctttgtcgccagcctgcaa
cgcctggaaccgcaggcgcccgaagcggtgctactcgccgccacgctgtgctgcgaggcg
ctggcggccggcgatgtctgtcttccactggaacgcctggccggaaggcgcccctggccc
gatgtcgatctcagcatgccggcgctgcccgtctggcacgcacagctcgaagcttccacg
ctggtcgggacaccggacgactatgcgccgctgaccctggtcggcgaccggctctacctg
gcccgctaccaggcctacgaacagcagctggccgaacagctgctggcccgcaccggcgat
gcgcccgaggtggacgaagcacggctcgccgagagcctggcgcgcttgttcgccttcaat
cagcagcgccccgactggcagcgcctggccgccgcccaggcagttcggcgtcggctggcc
gtaatctccggcggtcccggcaccggcaagaccaccaccgtggtgcgcctgctggcggcg
ctgctcgagcagcccggcggcgagcgcctggccatcggcctcgctgcacccaccggcaag
gccgcggcacgcatggccgaggcgatccgcaacgccaaggccgagctgccggtcagcgat
gcggtgaaggaggccctgccggacgaggcgcggaccctgcaccgcctgctcggcagccgc
ggcgacagcccccgagtgcgccacgatgcggccaatccgctggcgttggacgtgctggtg
gtggacgaggcgtcgatggtcgacctggcgctgatggccaaactggtcgtcgcgctgcca
ccgaaggcgcggctgatcctgctcggcgacaaggatcagctggccgccgtggaggccggt
gcggtgttcgccgaactctgcgaaggccgtggcttcgatgccggggcggcaagcgagctg
gagcgcatcaccggccagcccgtgccggtcgagacgccgcgctcgcgcctcggcgatgcg
gtggtgctgctcacccacagtcaccgcttcgccggcgacagcggcatcggcgagctggcg
cggcggatcaacgctggcgatgcgaaaggcaccgtcgcgctgctgcaggaaggtcgtgcg
gatctcgcctggaacgcgacgcccggcgcgaccgccttgatcgagcggctggagcagggt
tacggcggttacctgcaggctgcgcggcagggcgatccaggcccggcgttcgaggccttc
aacggtttccgggcgctgactgcgcaacgcgagggcccgttcggcgtgaccggtatcaac
gaggcgctggaaacacgcttcaggcgtcgcctcggcgtgccggcccgcgaacgctggtat
cccggccgtgcggtgatggtccggcagaacgactacgcgctggggctgttcaacggcgat
atcggcctgtgcctgaaaaccgagcagggcctgcgggtgttcttcgagggtgacaacggt
taccgcggcttcgcgccggcacggctgccgagccacgacagcgccttcgccatgaccgtg
cacaagagccagggctcggaattcaccgaggtgctgctggccttgccggatcagccgagc
ccgctgctgacgcgcgcgctgttctacaccggcataacccgcgccaagcgccgggtggag
atctgggcgctgccggcgcggctggctgaagcggtcagcacccgcgccgagcgcgccgcc
gggctggccgagcggctggttctggcgggcgccgtggccgatgccgatgcggtgccggaa
gccccgatcggtgcggcgccagccgagggcgatcagctcagcctgttctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

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