KEGG   Paenibacillus terrae: HPL003_16290Help
Entry
HPL003_16290      CDS       T01668                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pta  Paenibacillus terrae
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pta00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    HPL003_16290
Enzymes [BR:pta01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     HPL003_16290
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HPL003_16290
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3494542..3495372
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETIKRTLNELIVDKHIDHVTVNLPRIIQRPDDIHAFAMELAGHRITGVERRGK
FLRILLDGLVLVSHLRMEGRYGLYSQNDPVEKHTHVIFHFTDGTELRYQDVRQFGTMHLF
TEGQDLLEKPLNKLGLEPLDESFTPEALRAAVGTRSTSIKAALLNQSYVVGIGNIYVDES
LFKAGIHPAQSAKSLDDNQFRVLHEAIISTLSASILVGGSSIKSFVNGQGQSGDFQHQLQ
IYGRSVKPCVNCGTLIEKSVVAGRGTHHCPVCQPLR
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattaccggaagtagaaacgattaaacgaacgttaaacgagcttatcgtcgat
aaacatatagatcatgtgaccgtgaatctgccgcgcattattcagcggcctgatgatata
cacgcttttgctatggaattggctggtcatcgcattacaggagtggagagacgcggaaag
tttttacggattctgctggacgggctggtgctcgtttcccatctcaggatggaaggacga
tatggcctgtattcgcaaaatgatcctgtggaaaagcatactcacgttatctttcatttt
acagatggtacggaattacgctatcaggacgttcgccaattcggcacgatgcatttattt
acggaaggacaggatttgctggaaaagccgctgaacaagctcggtttggagccgctggac
gagtcctttacaccggaggcacttcgcgctgctgtggggacccgctcgacttcgatcaag
gcagcgctgttaaaccagtcatatgtcgtgggcatcgggaatatttatgtggatgaatcg
ttgtttaaggcggggatacatccggcacagtcagccaaaagtttggatgataaccaattt
cgtgtgctgcatgaagctattatctccacattgagcgcgtcgattttggtcggaggctcg
tccatcaaatcatttgtcaacggacaagggcaatcgggcgacttccagcatcaattgcaa
atctatggacgtagcgttaagccttgtgttaactgtggtacattgatcgaaaaatcggtc
gtagccggacgtggtacacatcattgcccggtctgccaacctctgcggtaa

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