KEGG   Paenibacillus terrae: HPL003_24545
Entry
HPL003_24545      CDS       T01668                                 
Name
(GenBank) DNA or RNA helicase of superfamily II
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
pta  Paenibacillus terrae
Pathway
pta03022  Basal transcription factors
pta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HPL003_24545
  09124 Replication and repair
   03420 Nucleotide excision repair
    HPL003_24545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pta03021]
    HPL003_24545
   03400 DNA repair and recombination proteins [BR:pta03400]
    HPL003_24545
Enzymes [BR:pta01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HPL003_24545
Transcription machinery [BR:pta03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     HPL003_24545
DNA repair and recombination proteins [BR:pta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     HPL003_24545
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD AAA_22 SNF2-rel_dom
Other DBs
NCBI-ProteinID: AET61625
UniProt: G7VVC8
Position
complement(5317584..5319392)
AA seq 602 aa
MNPDHPCIVQRDFTVLLEIGLPASEHARSQLQVYAELVKSPSAFHTYHITPLSLWNAAAL
GWSAADVQKSLHSMSRWDIPRDLLKDIEQLVSRYGTLTLSRARGDEEGHYSMHSIEQDAS
IGMETGRVHSCTSVDRLILTADSPALLDELLLKQDLEQLGLLRDSEVTVSVPPENRGLLK
QELTRLGFPVIDTAGYLEGNQLCFSLGQGQTDLKLRDYQMEAAYAFEGADGLGGSGVLVL
PCGAGKTVIGMAVMERLQCEVLILTSNTTSVRQWIEELKLKTDIPVESIGEYSGQKKEVR
PITAATYQILTHRRTKDGEFEHMKLLSERKWGLIVYDEVHLLPAPVFRATADIQATRRLG
LTATLVREDGCERDVFSLIGPKRYDMPWKELERQGWIAQVDCVELRLPMSAALLERSMRA
EGRQQYRIAAENPAKLEAVRSLMQQHKGLPTLIIGQYLDQLRILAQELSVPLITGSMSQA
ERVRWFDAFRNGTIRTLLVSKVANFAVDLPDAAVAIEVSGSFGSRQEEAQRLGRILRPKS
GENKAYFYALVTENSKETDFAARRQLFLIEQGYEYAIRRFSPEEVIGNLNDEAEAGGKKR
EA
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgaatccggatcacccttgtattgtacaacgcgattttaccgttttgctggaaatcggc
ctgcccgcttcggagcatgcacgttcacagttacaggtctatgctgagctggttaagagc
ccgtccgcttttcatacatatcacatcactccattgtctctgtggaatgcggctgccctt
gggtggagtgccgcggatgttcaaaagagtctacattccatgtcccgttgggatatcccc
cgtgatttgttaaaggatattgaacagctcgtctcccgttacggaacgttgacgctgtca
cgggcgagaggggatgaagaggggcattacagcatgcacagtatagagcaggatgcaagt
ataggcatggagacaggtagagtacatagctgtacatcggtcgaccgcttgatactaacg
gcggacagcccggctttactggatgaactgctgctcaagcaggatcttgagcagcttggt
ttgcttcgtgacagtgaagtgaccgtgtcggttccgccagaaaatcggggactgctcaag
caggaactgacccgacttggattccctgtcattgatacggcaggctatcttgaggggaat
cagctttgtttttctctaggtcagggacaaacggatctgaagcttcgtgattatcaaatg
gaggccgcctatgcgtttgaaggggctgacggtctgggtggcagtggtgtactggtgctt
ccatgtggagcgggaaaaaccgtaatcggtatggcggtgatggagcggcttcagtgcgag
gtgctcatattaacctccaataccacatctgttcggcaatggattgaggaattgaagcta
aagacggatattcctgttgaatctattggagaatacagtggacagaaaaaggaagtgcgt
ccgattacggcggcaacctaccagattttgacgcatcgccgtactaaagatggagaattt
gagcatatgaagctgctgagcgaacgtaaatgggggctaattgtatatgatgaggtgcat
ttgctgcccgcgccggtatttcgagcaacggcggatattcaggccactcgtcgtttggga
ttgaccgcgacgctggttcgggaggacggatgtgagcgggatgtgttctccttgatcgga
ccgaaacggtacgacatgccgtggaaagaattggagcgacagggctggatcgctcaggtc
gattgtgtggagctgcggcttcccatgtcggctgcacttttggagcgcagtatgcgtgct
gaaggcaggcagcagtatcggattgccgccgaaaatccagccaagctggaagcggtccgt
agcctgatgcagcagcacaagggcctgcccacgcttattatcgggcaatatttggatcaa
ttgcgtatattggcgcaggagctgagcgtgccgttgataaccgggtctatgagccaggct
gaacgggtgcgatggttcgatgcgttccgcaacggtacaattcggactctgctggtatcc
aaggtggcgaactttgctgtggatttaccggatgcggccgtggcaattgaggtatcaggc
agcttcggctcccgtcaggaggaggcacagcggcttggccgcattttgcgaccgaagtct
ggtgaaaataaggcttatttttatgcgctggtgacggagaacagtaaggagacggatttt
gcagcccgccgtcagctgtttctgattgagcagggctatgaatatgcgattcgcagattc
agcccggaggaggttatcgggaacctgaatgatgaggctgaagctggtgggaagaaaagg
gaggcgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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