KEGG   Paenibacillus terrae: HPL003_27930
Entry
HPL003_27930      CDS       T01668                                 
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pta  Paenibacillus terrae
Pathway
pta03410  Base excision repair
pta03430  Mismatch repair
pta03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HPL003_27930
   03430 Mismatch repair
    HPL003_27930
   03440 Homologous recombination
    HPL003_27930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pta03400]
    HPL003_27930
DNA repair and recombination proteins [BR:pta03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     HPL003_27930
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HPL003_27930
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HPL003_27930
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AET62296
UniProt: G7VTB6
Position
complement(6065285..6067681)
AA seq 798 aa
MLHSQYRWKTPEVNLEAAQPLTEELGISPLLSRLLVNRGVTTAGEANRFLYGSVDDIHDP
FLLMGMKEAVPRIRQALERGEHILIYGDYDADGVSSTSLMIQLMRFLKASYDIYIPHRSN
EGYGLHNHALDWANQQGVTLVITVDTGISAVEQIAYAATLGIDVIVTDHHEPPAMLPEAY
ALINPKLPGCPYPFKGLAGVGVALKLAQALLGEVPEEWFEIAAIGTVADLMPLHGENRTM
VRRGIQSMRSSAFPGIRALLGIAGVDMSTVTSVNIAFALAPRINASGRLDHAGRAVSLLT
TEQEEEADQLAHALDLLNRERQQVVERIVEQAEQQLAAKLNGGTLPSVIVLAGEGWNVGV
VGIVASKLLDRYYRPTIILGIDAETGMCKGSARSIPALDIYSALTDSHDLMEHFGGHPSA
AGMTLSRDNLASFEERLNRYAASILTPDNLVPVAEADMVCRLDEVSLQVVEELELLQPFG
MGNPSPRFVLQGLQLREARKMGREKNHVKLLLEQNGLSLDAIAFRRGDLADFLQQQTELD
LLGELSINEWNGKRSLQLMMQDIRVQAPQIFDYRGVSDPFAELERGLKIFHPRIEERKND
VAVVMHPSSRLRPSRPVNADSIWVYDKEGGVTPGDDRRDTQHSVKSLFVLEPPDTPEQLQ
ALWSTFEDVENVFLLHSVSERGGRLVSPDRELFKRIYVVLSRMGAQPVDEKATLPALSRQ
CSCSVRMLSKVLDIFEELEFITRTEGRFCFVSNPPKRDLTSSPRYQELHDMAEMERYLLD
ADTTQMTSWIMSLMKGAS
NT seq 2397 nt   +upstreamnt  +downstreamnt
ttgcttcattcgcagtaccgatggaagaccccggaggttaacctggaagcggcccagccg
ttgacggaagagctggggatttcaccattgttgtcccggcttttagtgaatcggggtgtc
actacggccggggaagcaaaccgctttttgtacggaagtgtagacgacatacacgaccct
tttctgctcatgggcatgaaagaggcagtgccgaggatccgtcaggcgctagagcgtggc
gagcacatattaatttatggtgattatgatgcggacggggtatccagtacgtcattgatg
attcagcttatgcgcttcctgaaagcttcgtatgatatttatattccgcaccgctccaat
gagggatatggactgcataatcatgcccttgattgggctaaccagcagggggttacgctc
gtcattaccgtggacacgggaattagtgcagtagagcaaatcgcttatgcggcaaccttg
ggtatagatgttattgtaacagaccatcacgagcctcctgctatgcttcctgaagcgtat
gctctgatcaatccgaagctgcccggctgtccctatccattcaagggtcttgctggtgtc
ggtgtcgctctaaagctggcacaggcgctgctgggtgaagtacccgaggaatggtttgaa
attgctgctatcggtacggtagctgatctgatgccgttacatggtgagaaccggacgatg
gtacgtagagggattcagtccatgagaagctctgcgtttccgggtattcgggcgttgctt
ggtatagcgggtgtggatatgtctacagtgacctctgtcaacattgcatttgccttggct
ccccggattaatgccagcggacgtctggatcatgcaggacgggcggtctcccttttaacg
acagagcaggaggaagaagcggatcagctcgcgcatgcgctggatctgctcaatcgggag
cgtcagcaagtagttgaacgtattgtggagcaggccgagcagcagctggcagccaagctg
aatggaggcacgctgccgtctgtcatcgtattggctggtgaaggctggaacgtaggtgtc
gtggggattgtggcatccaagttgctggatcgctattatcgtccaaccattattctgggc
atagatgcagagacaggaatgtgcaaagggtctgcccgttctattccggccttggatatt
tacagtgctctgacagatagtcatgacctgatggagcactttggcggtcatccttcggct
gcgggtatgacgctgtctcgggacaatctggcatcgtttgaggagcggttaaatcgctat
gccgcttccattctgacgccagacaatctcgttcctgtagccgaggcagatatggtttgt
cgtttggacgaggtatctttacaggtggttgaagaactggagttactccagccctttggt
atggggaacccgtctccacgtttcgtgttacagggtcttcaattgcgtgaggctcgtaaa
atggggcgtgagaaaaatcatgtaaagctgttgctggagcagaacggattatcgctggat
gcgattgccttccggcgtggtgatctggctgattttttgcagcagcaaaccgagcttgat
ctgctgggcgagctgtctattaatgaatggaacggtaaacgctccctccaactaatgatg
caggatatccgtgtacaggctccgcaaatttttgattatcggggagtatcggaccctttt
gctgagctggagcgggggctaaagatctttcatcctcgtatagaagaacgaaaaaatgac
gttgctgttgtgatgcatccatcgtccaggcttcgtccttctcgtccagtgaacgccgat
tccatatgggtatatgataaggagggcggcgttactcccggcgatgatcgaagggataca
caacactctgtaaagtcattgttcgtgttggagccaccggatacaccggagcagttgcag
gcattgtggtctacatttgaagatgtagagaatgtgtttctccttcattcggtcagtgaa
cgaggcggtcggctcgtcagcccggacagagagctgttcaagcgtatttacgttgtgctt
tcccgaatgggggcacagcctgtggatgaaaaagcgacgctgcccgctcttagtcgtcaa
tgctcctgttcagtacggatgctgtctaaagtgctggacattttcgaggagcttgagttt
ataacgcgtacagaagggcgcttctgttttgtgtccaatccacccaagcgggatttaacg
tcttctccacgttatcaggaattgcatgatatggctgaaatggagcgttatctgctggat
gcggatacaacccagatgacaagctggattatgtcgcttatgaagggcgcgtcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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