KEGG   Candidatus Phycorickettsia trachydisci: phytr_8400
Entry
phytr_8400        CDS       T05372                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ptc  Candidatus Phycorickettsia trachydisci
Brite
KEGG Orthology (KO) [BR:ptc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptc03032]
    phytr_8400
   03400 DNA repair and recombination proteins [BR:ptc03400]
    phytr_8400
Enzymes [BR:ptc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     phytr_8400
DNA replication proteins [BR:ptc03032]
 Prokaryotic type
  DNA Topoisomerases
   phytr_8400
DNA repair and recombination proteins [BR:ptc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      phytr_8400
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim GyrB_hook HATPase_c_3 MinE DUF2526
Other DBs
NCBI-ProteinID: AVP87772
UniProt: A0A2P1P921
Position
complement(924388..926760)
AA seq 790 aa
MLKGVEMSQNYTAESIKVLKGLEAVKKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAG
HCNKILITINQDGSVTVEDNGRGIPVDMHAEEGVSAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSDKLELTIWRDKKEYQISFSEGFTDNPLKCIGDTNKRGTQITFKPSAS
IFKTIEFNFEILEHRIKELSYLNSGVEIIITDNRGLAPKEVRFLSQGGINEYLQDLDKGK
NALHHPICANVPIGDNFVGVSFAMHWNDSYHENILCFTNNIRQRDGGSHLSGYKAGLTKA
INKYIETNSQKLKVSITSDDIREGVSCVLSVKVPDPKFSSQTKEKLVTSEVKPIVEQIVA
SQISTWLEEHPHDAKLILNKIVEAATAREAARKAREMTRRKSSLEISNLPGKLADCQEKS
PAKSELFIVEGDSAGGTAKQGRSRKFQAVLPLRGKVLNVEKARFDKVILSEQIGTLITAL
GAGIGKDDMDLEKLRYHKIIVMTDADVDGSHIRTLLLTFFYRHMKEVIENGYLYIAQPPL
YRVKKGQTEVYFKNDLELQKYFLESVTEDYRVNELSPEEFKQVLQDIAVFKDQIIRHVID
FDKQFAEILCIHPQVLQSILEGNSAPLNDIFLNINSDLRAQVEDQMLTLIKTVSGIEEKS
QIKISRLNSSEFKNLISLAESFSKYFVSGMSIVSKSLDTNTFHLPSELLDYVITKAQKGY
AIQRFKGLGEMSAEQLWETTLDPARRTLLKVTLENEDEIEKIFSTLMGYAVEPRREFIQD
NALRVSNLDI
NT seq 2373 nt   +upstreamnt  +downstreamnt
ttgctaaagggggtagaaatgagtcaaaactatacagctgaatctattaaagttttaaag
ggtcttgaagcagttaaaaaaagaccagggatgtatatcggtgatactgatgatggcagc
ggattgcatcatatggtctatgaagttgtggataatgccattgacgaagcattagctggt
cattgcaataaaatcttaataaccattaatcaagatggttctgttaccgtggaagataat
ggtcgaggtattcctgtagatatgcatgctgaggagggtgtgtctgctgctgaggttata
atgactcaactgcatgccggtggtaagtttgatcaaaattcgtataaagtatcaggaggg
ttgcatggtgttggtgtatcggtggtaaatgcgttatctgataaactagagcttacaatt
tggagagataaaaaagaatatcaaattagctttagtgaaggctttacagataatccttta
aaatgtataggggatacaaataagaggggtacgcagattacattcaaaccttctgcaagc
attttcaaaacaattgaatttaattttgagatcttagagcatcgtatcaaagagcttagc
tacctaaactcaggggttgagatcattattacggataacagaggtcttgctccaaaagag
gttagatttttaagtcaggggggaattaatgagtacttacaagacttggataaaggtaaa
aatgctttacaccaccctatttgtgctaatgtgccgattggagataattttgtaggggtg
agctttgcgatgcattggaatgactcttaccatgaaaatatcttgtgctttacgaataac
atacgtcagcgtgatggtggtagtcacttatctgggtataaagcaggtcttacgaaagcc
attaataagtatattgaaacaaattctcagaaacttaaagttagcatcacaagtgatgat
attagggaaggggtttcgtgcgtattatccgtaaaagtgccagatccaaaattttcatct
caaactaaagaaaagcttgtaacatctgaagtaaagccgattgtggagcagatagttgca
tcacaaatatctacttggcttgaagagcatcctcatgatgcaaaacttatattaaataaa
attgttgaagctgctactgctcgtgaagctgcaaggaaggcgcgtgaaatgacgcgtcgt
aaatctagcctagaaatttcaaatcttcctggtaagcttgcagattgtcaagaaaaaagc
cctgccaaatctgagctatttatcgttgaaggagattctgctggtggtacagctaagcag
ggacgtagcaggaagttccaagcagtcttgccgcttagaggcaaggtgcttaatgttgaa
aaggctagatttgataaggttattttatctgagcaaattggcactcttattacggctctt
ggggcaggtattggcaaagatgatatggatcttgagaagcttagataccataaaataatt
gttatgaccgacgctgacgttgatggttctcacatcagaaccttgttgctcactttcttc
tatcgtcatatgaaagaggtaatagaaaatggatatctctatatagctcaacctcctttg
tatagagtgaaaaaaggtcagacggaggtatattttaagaatgacctagagttgcaaaaa
tactttttagagtcggtgacggaagattatagagttaatgagctatctccagaagaattc
aagcaggtattgcaagatatagctgtatttaaggatcaaatcattcgtcatgttatagat
tttgacaagcaatttgcagaaattttgtgtattcatcctcaagttttgcaaagcattctt
gaaggaaatagtgcgcctttgaacgatatatttttaaacattaattcagatttaagggct
caggttgaagatcagatgttgactttaattaaaaccgtaagtggtatagaagaaaaaagt
cagatcaaaatctcaagacttaactcgtctgaatttaaaaatttaatatctcttgctgaa
agtttttcaaagtattttgtttcaggtatgagcattgttagtaagtctttagatactaat
acttttcacctgccatctgagcttttagattatgtgattacaaaagcccaaaagggatat
gcaattcaacgctttaagggtctgggtgaaatgagcgcggagcaactttgggagactaca
ttagatcctgcaagacgtacattattgaaagttacacttgaaaatgaggatgaaattgag
aagattttttctacactaatgggttatgcggttgagccaaggcgtgaatttattcaagat
aacgctttaagagtgagcaatttagatatttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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