KEGG   Pseudoalteromonas tetraodonis: PTET_a2305
Entry
PTET_a2305        CDS       T05282                                 
Symbol
hsdR
Name
(GenBank) type I restriction enzyme, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ptd  Pseudoalteromonas tetraodonis
Brite
KEGG Orthology (KO) [BR:ptd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ptd02048]
    PTET_a2305 (hsdR)
Enzymes [BR:ptd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PTET_a2305 (hsdR)
Prokaryotic defense system [BR:ptd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PTET_a2305 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N Helicase_C DUF2532
Other DBs
NCBI-ProteinID: ATD03652
Position
I:complement(2226777..2229617)
AA seq 946 aa
MVNQNAEQIARDKIDEMLKLAGWTVQDKTKINLNDGIGQAIREYQTDVGPADYVLFVDKK
AVGVIEAKREEAGEKITAVEDQTEGYANAKLKWVNNSEPLPFLYESTGVITRFTDGRDPK
PRSREVFSFHRPETLKAWVEQGNSLRARLQDIPPLNPAKLPAKDLGLRDCQETAITNLED
SLQKARPRALIQMATGAGKTYTAITSMYRILKHAKGKRILFLVDTKNLGEQAEQEMLNFT
PSDDTRKFTELHVVQRLKSKFVPKDAEVCISTIQRMYSILKDEELDETLEEQNPAEQLTK
PKEPVPVVYNPKVPIEHFDFIFIDECHRSIYNLWQQVLDYFDAFLIGLTATPDNRTYGFF
KQNIVSDYSHEKAVADGVNVGNEVFTIQTRITKEGETLQAKQQVEHRERVTRKKRWEQQD
EDEKYSAKQLDKDIVNPSQIRTVIKTFKESLPVIFPDREHVPKTLIFAKTDSHADDIIQT
VREEFDEGNSFCKKITYRVKKDKTDKEGNVIEQGEDPKSVLSSFRNLYEPRIAVTVDMIA
TGTDIKPLECLVFMRDVKSRNYFEQMKGRGTRTFDHDELIKVTPDAKSAKTHYVIVDAIG
VTKSLKTASQPLITKPSVPLKDLAMGIMMGASDTDSVSSLAGRLARLNKQLDADDKKRIE
KVSGGVSITQMVVDLFSAIDGDKVEEQALILAKQPKGTDPGEDNRNKAQAEMVSKAANVF
NGELIELIDTIRRDKDQKIDHDNIDEVQIADWEKATTEQASDICKDFVEYLEQNKDEITA
LEIFYDQPHRRREITFDMVKEVLEKLKSDKPKLAPLNVWQAYELLEDPDNKKEQGNKPIN
ELTALVALIRRVVGIDDKLSTFNTTVSKNFQTWIMKHHSGSNQKFTKEQMAWLHMIREHF
VNSFHFELDDLEMSPFDAQGGLGKMYQLFGDDMNKIIDELNSELVA
NT seq 2841 nt   +upstreamnt  +downstreamnt
ttggtaaatcaaaacgcagaacaaatagcacgcgataaaatcgatgaaatgctaaaactt
gcaggttggactgttcaagataaaaccaaaattaacttgaatgacggtatcggtcaagct
attcgtgaataccagacagatgtaggccccgccgattatgttctttttgttgataaaaaa
gccgttggggttatcgaagctaaacgagaagaagcaggtgagaaaatcactgccgttgaa
gaccaaaccgaaggctacgctaacgcaaagcttaaatgggtcaacaatagtgaacctctt
ccttttttatatgaaagtacaggtgttattacacgttttacagatggcagagatcctaag
cctcgctcccgtgaagtttttagttttcatagacctgaaacgctaaaagcatgggttgaa
caaggaaactctcttcgtgctcgtcttcaagatattccaccgttaaatccagcaaagcta
cctgcaaaagatttagggctgcgtgattgccaagaaacagcaataacaaaccttgaagac
tcgcttcaaaaagcgaggccgagagcgcttatccaaatggcaactggcgctggtaaaact
tataccgctattacatccatgtatcgcattcttaaacatgccaagggtaagcgtattctc
tttttagtggatactaaaaacttgggtgagcaagctgagcaagaaatgctcaactttacg
ccaagtgacgacacccgtaagtttaccgaactgcatgtcgtacagcgcttaaagtcaaag
tttgtgcctaaagatgctgaggtgtgtatcagtaccatccagcgaatgtactccatttta
aaagatgaagagttagacgaaacattagaagagcaaaaccccgctgaacaacttaccaag
cctaaagagccagttcctgttgtttacaaccccaaagtacctatagagcattttgatttc
atttttatcgatgaatgtcaccgctcaatctataacttatggcagcaagtattagattac
tttgatgctttcctgattggcttaacagcaacccccgataaccgcacttatggtttcttt
aagcaaaacattgtcagtgactatagccacgaaaaagctgttgctgatggtgttaacgta
ggtaatgaagtttttaccattcaaaccagaattaccaaagaaggtgaaacgttacaagct
aagcagcaagttgagcaccgagaacgtgtgacacgtaaaaaacgctgggagcaacaagat
gaagatgaaaagtacagtgcaaaacagcttgataaagatatcgtaaaccctagtcaaatt
cgtacagtcatcaaaaccttcaaagagagtttacctgtcattttccctgatagagaacat
gtgccaaaaacattaatctttgcaaaaaccgacagccatgctgacgatattattcaaacg
gttcgagaagagtttgacgaaggtaactctttctgtaaaaaaatcacctaccgtgtaaag
aaagacaaaacagataaagaaggtaatgtaatcgagcaaggtgaagatcctaaatcggta
ctctccagcttcagaaatctatacgaacctcgcattgcagtaaccgttgatatgatagca
acaggtacagatataaaaccacttgagtgccttgtgttcatgagagatgttaaaagtcga
aactatttcgagcaaatgaaaggtcgcggaacacgtacttttgaccatgatgaattaatc
aaggtaacgccagatgcaaagtctgcaaaaacgcactatgttattgttgatgcaattggt
gttactaaatcacttaaaacagcgagtcagcctttaatcactaaaccatctgtaccactc
aaagatttggctatgggcatcatgatgggggctagtgatactgactctgtaagttcactt
gctggcaggttagcacgattgaacaagcagctagatgccgacgataaaaagagaattgaa
aaggtatcaggtggtgtctcaattactcaaatggtagttgatttattctcggctattgat
ggcgacaaagtagaagagcaagcgttaatactggcaaaacagccaaaaggcacagaccca
ggcgaagataatcgcaacaaagcccaagctgagatggtaagtaaagccgccaatgtattt
aacggagagttaattgagcttatcgataccatacgccgagataaagaccaaaagatagat
catgacaacatcgatgaagtgcaaatagctgattgggaaaaagcgacaaccgaacaagca
tctgatatctgcaaagattttgttgaatacctagagcaaaacaaagatgagattaccgcg
ttggaaatattctacgaccagccacaccgtcgtcgtgaaattacctttgatatggtcaaa
gaggtgctcgaaaaactcaaatcagataaacctaaactagccccactaaatgtatggcaa
gcgtatgaattactcgaagaccctgacaataaaaaagaacagggtaataagccaattaat
gagttaaccgctttagtcgcattaattcgccgtgtagtaggcattgatgataaactctcg
acctttaataccaccgtcagcaagaatttccaaacgtggatcatgaagcaccactcaggt
agcaaccaaaagttcactaaagaacaaatggcgtggctacatatgatccgtgaacacttt
gttaattcattccattttgaattagatgatctggaaatgtcaccatttgatgcacaaggt
ggtttaggcaagatgtatcaactctttggtgatgatatgaataaaattatagatgaatta
aatagtgagttagtagcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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