KEGG   Pyrenophora teres: PTT_15561
Entry
PTT_15561         CDS       T01613                                 
Name
(GenBank) hypothetical protein
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
pte  Pyrenophora teres
Pathway
pte03020  RNA polymerase
pte03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pte00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PTT_15561
  09124 Replication and repair
   03420 Nucleotide excision repair
    PTT_15561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pte03021]
    PTT_15561
   03400 DNA repair and recombination proteins [BR:pte03400]
    PTT_15561
Enzymes [BR:pte01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PTT_15561
Transcription machinery [BR:pte03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PTT_15561
DNA repair and recombination proteins [BR:pte03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PTT_15561
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R
Other DBs
NCBI-ProteinID: EFQ88526
UniProt: E3S0I4
Position
Unknown
AA seq 1738 aa
MAPGVPAVSKCPLRTIKEIQFGLLSPEEIKAMSVVHIIYPETMDEQKQKPREQGLNDPKL
GTIDRMYHCSTCKEDIQVCPGHFGHIELHTPVFHVGFVVKIKKLLETVCHTCGLIKADFN
HPDWIAATKTKDAKKRFDKIWRMSRTKSTCDADGPDAGKDKIPKIPHGGCGSAQPDTIRK
DGLKLTATWKQKKKEDDDGSGDRKEVITPKQAQTIFKLMTENTLALLGLNADYARPEWMI
LDVLPVPPPPVRPSISVDGTGQGMRGEDDLTYKLGDIIRANGRVAECQQEGSPQHVTAEF
EALVQYHVATYMDNDANGVPQAMQKSGRPLKTIRGRLKGKEGRLRGNLMGKRVDFSARTV
ITGDPNLSLDQVGVPRSIARTLTYPEVVTKFNISKLTNLVRNGPNQHPGANYVIKADGAR
LDLKHNKNLDDLRLQYGWKVERHINDDDVIIFNRQPSLHKESMMGHRVKVMPYSTFRLNL
SVTSPYNADFDGDEMNLHVPQSDETRAEVQNLCMVPKQIVSPQKNQPLMGIVQDTLLGVY
KMSRRDNFIGIEQVMPILMWVPDWDGIVPEPAILKPRPLWTGKQLVSMAFPKEVNIEKKE
DDSSPSPQNDIRDKSLMIKSGQLIYGQVTKKIVGASAGGVIHIIFNELGPDAAVKFFNAC
QRICNWWLLHHGFSFGVGDTIPDPATSEKIADEVRKSREKVEQIIEQATLDELEPMPGMT
IRGTFESKVQKFLNEAREGGGTAAQTSLKDFNNVVQTVVSGSKGSTVNISQMVALVGQQA
VEGQRIPYGFKYRTLPHFAKDDYSPESRGFVENSYLRGLTPSEFFFHAMAGREGLIDTAV
KTAETGYIQRRLVKALEDVMVKYDGTVRNSMGDIVEFIYGEDGLDGAYIEKQSMDTIMCS
DADFEAAYKLDVLTTDQPEIPVWKLEGSPMFQGDVDVQRALDQEFEEIKNDRAVLRDTLN
EDELDSFQLPLNIQRMIRSAQARFGINPEKAVSNLTPIEAIQQVRETLDRLIVIRGTDEL
SIEAQNSATQLFKAHLRARLAFKKLAVQHRLNKEALKYILGELEDRFLKAAVAPGEMVGV
LAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVAANIKTPSMLVRQIDKKAD
QGDAKKLRSTIELTTLRSLTQAVELYYDPDIQSTRVEDDQDMVESYFILPEEDEVIESQS
KWLLRIILDRKKLLDKSITIGEVAGKIKEEFKPNLAVIFSDENADEQVMRVRFIWDQNLT
KDDEDEDERDERWMRKLEHHLLDDVTLRGVPGVERAFIREHCVTKKRDDGSLLHSKSSPE
CKEWVLDTTGTALAEVLSIPGVDASTTYSNSFIEILAVLGIEAARAGLLKELGMVLSFDG
SYVNHRHMALLVDIMCQRGVLMAITRHGINRNDTGALMRCSFEETVEILLEAAGFGELDD
CRGVSENIMLGQLAPMGTGEFDVVMDNGMLLTMVEDNSKMMGGAAGAGAYMSDGAATPYD
LGSPTYEGGMGMGGGYDQVSFSPMAAAGGGDDQGGFTAYGGTYGSGGFSPYDGGRSPGGS
GFTGMSPGFTSPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYG
SPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYS
PTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFSPTSPRYSPTSPGPAYSPT
NT seq 5217 nt   +upstreamnt  +downstreamnt
atggctcccggcgtgccagcagtctcaaaatgtccgctccggaccatcaaggagatccag
ttcggtctgctctcgcccgaggagatcaaggccatgagcgtcgtccacatcatctaccct
gaaaccatggacgagcagaagcagaagccgcgcgagcagggtctcaacgatcccaaactc
ggtactattgaccgcatgtaccactgctcgacgtgcaaagaagacattcaggtctgcccc
ggccactttggccacatcgagctgcatacgcccgttttccacgttggattcgtcgtcaag
atcaagaagctcctcgagactgtgtgccacacctgtggcctgatcaaggctgactttaac
caccccgattggatcgccgccaccaagacaaaggacgcaaagaagcgttttgacaaaatc
tggcgcatgtcgcggacaaagagcacgtgcgacgctgacggccctgacgctggcaaagat
aagatccccaagatacctcacggcggctgtggcagcgcacagcctgacaccattcgcaaa
gatggtctcaaactcaccgccacctggaagcagaagaagaaggaagacgacgatggctcg
ggcgaccgcaaagaagtcatcacccccaagcaagctcagaccatcttcaagctcatgacg
gaaaacacgctagcgctgcttggcctgaacgccgactatgcgcgccctgagtggatgatt
ctcgacgtcttgcccgtacctccgccaccggtgcgtcctagtatctccgttgatggtact
ggtcagggtatgcgtggagaggatgacttgacgtataagctgggtgacatcatccgcgca
aacggtcgcgtcgccgaatgccagcaagagggttcacctcagcacgtcactgctgagttt
gaagctcttgtccaataccatgttgcgacatacatggacaacgacgccaatggtgtccca
caggccatgcagaagtctggtcgtcctctaaagaccatccgtggtcgattaaagggcaag
gagggccgtcttcgtggtaacttgatgggcaagcgtgtcgacttctcagcacgtactgtc
atcactggtgaccctaacctttcactggaccaagttggtgttccccggtctatcgcccga
actcttacctaccccgaagttgtcacaaagttcaacatcagcaaactcaccaacttggta
cgcaacggtccaaatcagcatcctggtgccaactacgtcatcaaggccgacggtgcccgt
ctcgacctcaagcacaacaagaatctcgatgatctgcggctgcagtatggctggaaagtt
gagcgccacatcaacgacgacgatgtcatcatcttcaaccgtcagccctctcttcacaag
gagtctatgatgggacatcgcgtcaaggtcatgccctactccaccttccgtctcaatctc
tcggtcacatctccatacaacgccgatttcgacggtgacgagatgaacctccacgttcct
cagagcgacgagacccgtgctgaggttcagaacctgtgcatggtcccaaagcaaatcgta
tcgccccagaagaatcagcccttgatgggtatcgtgcaggacacgcttctcggtgtctac
aagatgagccgtcgtgacaacttcatcggtatcgaacaagtcatgcccattctcatgtgg
gtgcctgattgggatggtattgttccagagcccgccattctcaaacctcggcctctctgg
accggaaagcagctcgtgagcatggctttccccaaagaggtcaacatcgagaagaaggag
gatgattcttcaccttcgccgcagaatgatatccgggataagagtctcatgatcaagagc
ggtcagctgatttatgggcaagtcactaagaagattgtcggtgcttcagcgggtggtgtt
attcacatcatcttcaacgaactcggtccggatgcggctgtcaagttcttcaacgcttgc
cagcgtatttgcaactggtggttgctccaccacggcttcagtttcggtgtgggtgacacc
attccggatcctgcgacctcagagaagattgccgatgaagttcggaaatcgagagaaaag
gtggagcagatcatcgagcaagcaactttggatgagctcgagcctatgcccggtatgaca
attcgtggtacttttgagtcaaaggtccagaagttcctcaatgaagctcgtgaaggtggc
ggtactgcggctcagacgagtttgaaggatttcaacaacgttgtccagactgtcgtttct
ggttcaaagggttccactgtcaacatctcccagatggttgcccttgtcggtcaacaggct
gtggaaggacagcgtattccatacggcttcaagtataggacattgccgcatttcgccaaa
gacgactattcacccgaatctcgtggtttcgtcgagaactcctatctccgtggtctcaca
ccctccgaatttttcttccacgccatggctggtcgtgagggtttgatcgataccgcagtc
aagacagccgagactggatacattcaacgtcgtttggtcaaggccctcgaagacgtcatg
gtcaaatacgatggcactgtgcgtaactctatgggagacattgtcgaattcatctatggt
gaagatggtcttgatggagcttatatcgaaaagcagtccatggacaccatcatgtgctcc
gatgctgacttcgaggctgcgtacaagctggacgtgttgactactgaccagcccgagatt
ccagtctggaagcttgagggctctcccatgttccaaggtgatgtagacgtgcagcgagct
cttgaccaagaatttgaggagatcaagaatgatcgtgctgtccttcgcgacacattgaac
gaggacgagcttgatagcttccagttacctctgaacatccagcggatgatccgatctgct
caggctagattcggcatcaacccggagaaggctgtcagcaacctcactcctattgaggcg
atccagcaggtccgcgaaacactcgatcggttgattgtcattcgtggtaccgatgaactg
tcgatagaagcgcaaaacagcgcgactcagctcttcaaagcacatcttcgagctcgtctc
gcttttaagaagcttgctgtccagcaccgcctaaacaaggaggccctcaaatacatcctg
ggagaactcgaagatcgcttcctcaaggctgctgttgcgcctggtgagatggttggtgtc
cttgcagcgcaatcgattggtgagcctgccacgcaaatgacactgaacactttccatttc
gctggtgtgtcttccaagaacgtcactctcggtgtaccacgtctcaaggaaattctcaac
gtcgctgcaaacatcaagacaccgtctatgcttgtccgacaaattgataagaaggccgac
caaggagatgccaagaagttgcgcagtacgattgagcttacgactctgcgctcattgaca
caggcggttgagctctactacgatcccgatattcagtcaaccagggtggaagatgaccag
gacatggttgagtcctacttcattctacccgaagaggacgaagtcattgaatcacagtct
aaatggttgcttcgtatcatcctcgaccgcaaaaagttgctggacaagagtatcaccatc
ggcgaagtcgctggaaagatcaaggaggagtttaagcccaatctcgctgtcatttttagt
gatgagaacgcagatgagcaagtcatgcgcgtccgtttcatctgggaccagaacctcaca
aaagatgacgaagacgaggatgagcgagacgagcgatggatgcgcaaacttgagcatcat
cttctcgacgatgtcactctacgtggtgtacctggcgttgagcgtgcctttatccgtgaa
cactgtgtcaccaagaagagggatgatggatcgcttctgcattccaagagcagccccgag
tgtaaagagtgggtgctcgacaccaccggtaccgccttggctgaagtactgtcaattcca
ggtgtggatgcctccaccacgtactctaactcgtttatcgaaatccttgctgtgcttggt
attgaggcggctcgagctggtcttctcaaggaattgggcatggtcttgtcctttgacggc
tcatatgtcaaccatcgtcacatggcattgcttgtcgacatcatgtgccagcgtggtgtt
ctcatggccatcactcgtcacggcatcaaccgtaacgacaccggagcgctcatgcgttgt
tcgttcgaagaaacggtcgaaattctactcgaagctgctggctttggtgagctggatgac
tgccgcggtgtatcagagaacatcatgctgggtcaacttgcgcctatgggtactggagaa
tttgatgttgtcatggacaacggcatgcttctcaccatggtcgaggataactccaagatg
atgggtggtgccgccggtgcaggcgcttatatgagtgacggtgcggccacgccttacgac
ttgggctcacctacgtatgaaggaggaatgggtatgggcggaggatatgaccaagtttcc
ttctcgcccatggctgctgcaggtggcggagacgatcagggtggctttactgcgtatgga
ggcacttatggtagcggtggcttcagcccctacgatggagggcgaagcccaggtggctca
ggctttaccggcatgtctcctgggtttaccagtccggtctcgccaggcttctctcccact
tcgcctggttactcgcccacttctccaggaaccgctagccctcgcttcgctgcaacgtcg
ccgggttatatggcatcacctacgtccccacactactctccgacgtcgccgcggtacggt
tcgcctacatcgccgtcatactcgcccacgtctccggctggttactcgccgacgtcacct
caatactctcccacgtcgcccaactacagcccgacgtcaccaacgttcatgggaggcgca
acatccccagcgtacagccctacatcaccgcagtacagtccgacatcacctcagtatagt
ccgaccagcccacagtaccaagccaccagcgatcgtcgtagccccacatcgccgacgtct
cctcaatacagcccgacgtcgccccgctactcgccaacgagcccggcaggatccttctct
ccgacgtcaccccggtacagcccgacatccccagggcctgcctattccccaacgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (71)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (91)   

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