KEGG   Pyrenophora teres: PTT_18129
Entry
PTT_18129         CDS       T01613                                 
Name
(GenBank) hypothetical protein
  KO
K13025  ATP-dependent RNA helicase [EC:3.6.4.13]
Organism
pte  Pyrenophora teres
Pathway
pte03013  Nucleocytoplasmic transport
pte03015  mRNA surveillance pathway
pte03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pte00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PTT_18129
  09122 Translation
   03013 Nucleocytoplasmic transport
    PTT_18129
   03015 mRNA surveillance pathway
    PTT_18129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pte03019]
    PTT_18129
   03041 Spliceosome [BR:pte03041]
    PTT_18129
   03009 Ribosome biogenesis [BR:pte03009]
    PTT_18129
   03012 Translation factors [BR:pte03012]
    PTT_18129
Messenger RNA biogenesis [BR:pte03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PTT_18129
   mRNA cycle factors
    Stress granule specific factors
     PTT_18129
Spliceosome [BR:pte03041]
 Complex C
  Other components
   EJC/TREX
    PTT_18129
Ribosome biogenesis [BR:pte03009]
 Eukaryotic type
  90S particles
   Helicases
    PTT_18129
Translation factors [BR:pte03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    PTT_18129
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 Flavi_DEAD TniB AAA_22 UvrD-helicase
Other DBs
NCBI-ProteinID: EFQ86604
UniProt: E3S616
Position
Unknown
AA seq 399 aa
MADGIDRNADDKMEFSTSKEVTVAPTFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQVC
KGRDTIAQAQSGTGKTATFSISILQVIDTAVRETQALVLSPTRELATQIQSVIMGLGDYM
NVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRNIKMLVLDEADELL
NRGFREQIYDVYRYLPPATQVVVVSATLPYDVLEMTTKFMTDPVRILVKRDELTLEGLKQ
YFIAIEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQ
RERDSIMQDFRQANSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGR
KGVAINFVTQDDVRILRDIELYYSTQIDEMPMNVADLLA
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggccgacggaatagatagaaatgcggacgataagatggagttctccacctccaaggag
gtcacggtagcgccgacgtttgaggcgatgcacctgaaggagaacctgctgcgcggcatc
tacgcctacggatacgagtcgccttcagcagtacagtcacgtgctattgtacaggtctgc
aaaggtcgtgataccattgcacaggcgcagtcgggaacgggaaagacggcaactttctcc
atatccattctccaggttatcgatacagcggtgcgcgagacacaagcactcgttctttcg
cccacccgcgaacttgcgacccaaatccagtcggtcatcatgggtctcggcgactatatg
aacgtacaatgccacgcctgcattggaggaacaaacgtgggcgaggatatccgcaaactc
gactacggtcagcacgtcgtctctggaacgccaggacgtgtggctgacatgatccgccgc
cgtaacctccgcacacgcaatatcaagatgctcgttcttgacgaagccgatgagctcctc
aaccggggatttcgcgaacaaatctacgacgtctaccgctacctcccacccgccacacaa
gtcgttgtagtctccgccacacttccgtacgatgtgcttgagatgaccaccaagttcatg
acggatcctgtgcgcattctcgttaagcgcgacgaactgacgctcgagggtctcaaacag
tacttcatcgccattgaaaaggaggagtggaagtttgacactctctgcgatctctatgac
acacttaccattacacaagcagtcatcttctgcaacacccgacgcaaggttgactggctg
accgacaagatgcgcgaggccaacttcactgtatcctcaatgcatggagatatgcctcag
agggagcgagacagcattatgcaggacttccgccaggccaactcgcgcgtgctgatctcg
accgatgtgtgggcccgtggtattgacgtccaacaagtatcgctggtcatcaactatgat
ctcccctcgaaccgcgagaactatatccacaggattggtcgaagcggtcgatttggacgc
aagggtgtagccatcaacttcgttacccaggatgacgtgcgcattctccgcgacattgag
ctctactactccactcagattgatgagatgcccatgaacgttgccgatctgctggcgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (40)   

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