KEGG   Pelotomaculum thermopropionicum: PTH_1518
Entry
PTH_1518          CDS       T00519                                 
Symbol
TrmA
Name
(GenBank) SAM-dependent methyltransferases
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
pth  Pelotomaculum thermopropionicum
Brite
KEGG Orthology (KO) [BR:pth00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pth03009]
    PTH_1518 (TrmA)
Enzymes [BR:pth01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     PTH_1518 (TrmA)
Ribosome biogenesis [BR:pth03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PTH_1518 (TrmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Met_10 Cons_hypoth95 Methyltransf_25 MTS Methyltransf_15 PrmA Methyltransf_32 Methyltransf_11 Ral
Other DBs
NCBI-ProteinID: BAF59699
UniProt: A5D234
Position
1581422..1582834
AA seq 470 aa
MTAGQSFPVQKNERIVLQISGINHSGEGVGRYRGLAVFVPGAAPGDQVVAEVSDVKKNYA
RARLLGIKTASPARREPECGRFSRCGGCRLQHINYGEQLMLKTILVKDSLARIAGLEKVK
VRAAAGMEHPWHYRNKVHFQVEERPDKIALGFYEEGTHNLTAFFNEGACPGTGCLLVDDE
LNKLAALIEKLLNRHRGPFGRRILPQKRQSRFFRHIVLRKGFFTGEVMAVLVTGSGEWPG
EKAFVKELLSLRPGLVSLVRNINDGPPGVLFGKKSRCLAGREHIKDRLGHLIFRISPSSF
YQVNPVQTLVLYNKVQQYAALTGRETVVDAYSGIGSIALFLAGRAKRVYGLEALPDAVAD
ARKNAALNKITNAEFLTGKVESLIPILAAQGQRPEVVVLDPPRHGCGREVLEAVVQMQVP
RLVYVSCNPATLARDLRYFADNGYLVDEVQPVDMFPWTAHVECVVLMSRL
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgacggccggccaaagctttcccgtacaaaaaaatgaaaggattgttttacaaataagc
ggtataaatcattccggggaaggggtgggacgttaccggggcctggccgtgtttgtccct
ggcgcagcaccaggggaccaggtggtagccgaggtttccgacgtcaagaaaaattacgcc
cgggcccgcctgctggggataaaaacggcctccccggccagacgggagccggagtgcggc
cgtttttccagatgcgggggctgccgcctgcagcatataaactacggggagcaattgatg
ctgaaaacaatcctggttaaggacagcctggcccgcatagccggcctggaaaaggttaag
gtcagggctgcagccggaatggagcacccctggcattaccggaacaaggtccattttcag
gtagaagagcgccccgataaaatagctttgggtttttacgaagagggcactcacaacctg
accgcctttttcaatgaaggtgcttgtccaggtacaggctgcctgctggtagacgacgaa
cttaacaaactggccgcactgattgaaaagctgcttaaccggcacagggggccctttggc
cggcgcatcctcccgcaaaaacggcaatcccggtttttccggcacattgtcttgcgcaaa
ggctttttcaccggcgaggtaatggccgtgctggttaccggcagcggagaatggcccggt
gaaaaagcctttgtgaaggaattgctgtccttgcggccgggcctcgtctccctggtgcgc
aacatcaacgacgggccgccgggcgtgctcttcggaaagaaaagccgctgcctggccgga
cgggagcacatcaaagaccgcctgggacacctcatctttcgcatatccccgtcttccttt
taccaggtcaaccctgtgcaaactctggtgctgtacaataaggtgcagcagtacgcggcg
ctgaccggcagggagacggtggtggacgcttatagcggcatcggctccattgccctgttt
ctggccggccgggcgaaaagggtgtacggactggaagcattgcctgacgctgtggcggac
gcccggaaaaatgccgccttgaataagataacaaatgctgagtttttgaccggtaaagtg
gaaagtctcattcccatcctggccgcgcagggtcagcggccggaagtggtggtgctggac
ccgccccggcacggctgtggccgggaggtcctggaggcggtggtacagatgcaggtgccg
cggcttgtttacgtttcctgcaaccctgctacgctggcacgtgacctccgctactttgca
gataacggttacctggtagacgaggtccagccggtggatatgtttccctggacggcgcac
gtggagtgcgtggtattgatgtcaaggttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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