KEGG   Phaeodactylum tricornutum: PHATRDRAFT_13622
Entry
PHATRDRAFT_13622  CDS       T01075                                 
Symbol
RPN1
Name
(RefSeq) regulatory proteasome non-atpase subunit 1
  KO
K03028  26S proteasome regulatory subunit N1
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03050  Proteasome
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    PHATRDRAFT_13622 (RPN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pti03051]
    PHATRDRAFT_13622 (RPN1)
Proteasome [BR:pti03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     PHATRDRAFT_13622 (RPN1)
SSDB
Motif
Pfam: RPN1_RPN2_N RPN1_C PC_rep TPR_15
Other DBs
NCBI-GeneID: 7202013
NCBI-ProteinID: XP_002181371
JGI: 13622
UniProt: B7G2F7
Position
12:complement(392886..395722)
AA seq 916 aa
MADVSPKDSGNAKGKGLKKEEIVDTLSEDDKELKERLETCVTTLVNAANEASVTTAIRNN
ALDVMVNELRTATASMTSVPKPLKFLRPHFALLKSCYDAIGDCDNELIELRARLSDVLAV
LAMTMGKPEERESLKFKLAGVKDYALLRDRKSPSKHADDNLGSWGHEFVRSLAGEIGQEY
DQRVIDGADPNQDDSFEDLLSMIDVIVPFHVSHNAESEAIDLLIEVQRLKNLLKLDTIDE
TNYQRICLYLIKTADYMSDPDDLSEMLETALEIFKSQHQYFDALRVALRMNDTEKIADLL
KACTDPLMRKQMCLLLGRHRVNFDAEEADIEDDDVELLSELIGNEKLSEQFLKLAQDLDV
MDPKTPEDIYKSHLAETGGFSRRRDTSANVDSARANLASTYVNAFVNAGFGQDKLMTPDN
DWLYKNKDHGMMAAAASLGSILLWNVEEGLTQIDKFLYSNEDYVKAGAALAVGIVSSGVR
NDADPALALLSEHVEGESHVMKCAACTGLGIAYAGSAREDVMEILTPVVESSEGGPTTMM
EVSLAGLALGMIFVGTCDDMVGGTIVQRLMEATDDELDHTHARFLCLGLALLFLGQMEKA
EAMIEALRTVEHKIAKYAVVMLETAAYAGSGNVLKVQEMMHQCAEHLTEDAEHQMAAVLG
IGLITMGEAVGSEMALRTFDHLLHYCELPIKRAVPLSLAVLNISNPDFAVIDQLSRLSHD
PDIEISQNAIFGLGIVSAGTNNSRVAGLLRQLSEFYSKEAGHIFCVRIAQGLLHMGKGLM
TLNPVHSDRMLMNGPALGGMLVLLHSCLDLKSTLLDKSHYLLYYLTCAMNPRMLITVDEE
LNWRPVTARVGQAVETVGQAGKPKRITGFQTHTTPVLLAATDLAELGTEEVFSMSSVLEG
IVILKDNPDYEPEEKK
NT seq 2751 nt   +upstreamnt  +downstreamnt
atggcggacgtgagcccgaaggatagcggaaacgcgaagggcaaaggtctcaagaaggaa
gaaattgtcgataccttgtccgaagacgacaaggaactcaaggagcgtttggaaacctgc
gtaaccacactcgtaaatgcagcaaacgaagcttccgttactacggcgattcgcaataac
gccttggatgtgatggttaatgaactccgaaccgcaacagcttcaatgacgtcggtgccc
aaaccgctcaagttccttcgtccgcattttgctttgctgaaatcctgttacgatgcgatt
ggagactgcgataacgaactcatagaactgcgtgctcgcttgtcagatgttttagctgtt
ttggccatgaccatgggtaagccggaagaacgcgagagtctgaagttcaagcttgcaggg
gtcaaggattatgcgctattgagggatcggaaatcaccgtcgaaacacgccgacgacaat
ctaggatcctgggggcacgagttcgtccgatcactggcgggtgaaattgggcaagaatac
gatcagagagtgattgatggagcggatccgaatcaagacgactcgttcgaggatttgctg
tcgatgatcgacgttatcgtgccctttcacgtttcccacaatgccgaatcggaagcgatt
gatctcttgattgaagttcagagactcaaaaacctattgaaactcgatacaatcgatgag
acgaattaccagcgcatctgtttgtatctgatcaagacagcggactacatgtcggacccg
gacgatctttcggaaatgctggaaacggcactggaaatatttaagtctcagcaccagtac
ttcgacgcactacgtgtggcgttgcgaatgaacgacaccgaaaaaatcgcagatttactc
aaggcttgtaccgaccccttgatgcgaaagcaaatgtgtctcttattggggcgccatcga
gtcaacttcgacgccgaagaagccgatatcgaggatgacgacgttgagctgcttagtgag
ctaattggtaacgaaaagctgagcgagcagtttctcaagttggcccaggatctcgacgtt
atggatcccaaaacgcctgaggatatctacaagtcccatttggctgaaaccggaggcttc
agtcgtcgtcgggatacgagtgcgaatgttgactcggcccgggccaatttggcaagcacc
tacgtcaacgctttcgtcaatgcgggttttggtcaagacaaactgatgactcccgacaac
gattggctatataaaaacaaagaccacgggatgatggcggcagcagcctcattgggatcg
attcttctctggaacgtcgaagaaggattgacacaaatcgacaaatttttgtattctaat
gaagattacgtcaaagctggagctgcgctggccgtcggcattgtaagtagcggtgtacgc
aatgatgccgatcctgcgctggctctactgtcggaacacgtagaaggtgaatcacatgtt
atgaaatgtgccgcttgcactggtttgggcatagcttacgctggttcggcacgtgaagat
gttatggaaatcctcacgccggttgtagagagttcagaaggcggcccgaccacgatgatg
gaagtttcgttggcaggtcttgctctcggcatgatctttgttggcacatgtgacgatatg
gtaggaggtaccattgtacaacggttgatggaagcaacggatgatgaactggatcatacg
catgcccgctttctttgtcttggattggctctcctgtttctgggacaaatggaaaaggct
gaagctatgatagaagctctccgcacagtagaacacaaaattgcgaaatacgctgttgtc
atgttggagactgcggcctacgctgggtctggcaacgttctcaaggtccaagagatgatg
caccagtgcgccgagcacttgacagaggacgcggagcatcaaatggcggctgttttggga
attggtttgatcacgatgggcgaagcggtgggttctgaaatggcgctgcgaacattcgat
cacttgctgcactactgcgaattgccgatcaagcgcgctgtgccactttcattagctgta
ctaaacatttccaatccagactttgcagtaatcgaccagctttctcgtctgtctcacgat
cctgacatagaaatttctcaaaacgctatttttgggctgggtattgtcagcgccggtaca
aacaactctcgtgtcgccgggcttttgaggcagttgagcgagttttacagcaaggaagct
ggccatattttttgcgtgcgaattgcgcaaggcctgctacatatgggtaagggtttaatg
acacttaacccagtccattccgatcgtatgctcatgaatggacctgctcttggtggtatg
cttgttttgctgcactcttgcctcgatctcaagagtactttgctggacaagagtcactat
ctgctttactacctgacatgcgcaatgaatccccgaatgctgattacagtcgacgaggaa
ttgaattggcgaccagtaactgctcgcgtgggacaggctgtcgagaccgttggacaagca
gggaagcccaagcgtataactggcttccagacgcacacgacacctgttctgcttgctgca
acggacctagccgagcttggcaccgaagaagtgttcagcatgagcagtgtgctagagggt
atcgtgatcttgaaagacaatccagactacgaacccgaagaaaagaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (376)   
   KEGG ORTHOLOGY (1)   
   RefGene (371)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (387)   

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