KEGG T01075: PHATRDRAFT

Phaeodactylum tricornutum: PHATRDRAFT_20608

Entry

PHATRDRAFT_20608 CDS T01075

Definition

hypothetical protein

Orthology

K00962

polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]

Organism

pti Phaeodactylum tricornutum

Pathway

pti00230	Purine metabolism
pti00240	Pyrimidine metabolism
pti03018	RNA degradation

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:pti00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:pti00240]
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:pti03018]

SSDB

Motif

Pfam:

RNase_PH RNase_PH_C KH_1 S1 KH_3 KH_5

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 830 aa
MAFNMKFLALFLTFFQGEECWAFHPIASFRSGRSGRKGVDGSASTSSRWASDGSGTAFSI
ESDHSGPAGFPVHRVIFHSLPGQEQDVPPICIETGKIGRQAAGAVTLTRGDSVLYATTSH
DKDPKEEIDFCPLSVDYQERFSSAGLTSGGYNKRDGRPAEHEILTCRLIDRPLRPLIQSG
WRHETQLLSWVLSYDGERSCDPLAIIASASSLFISDVPLHKPVAAVQVGMKDDGTLVVNP
TNLQMETSKLNLMVAGTEEAVLMIEGAADFLPESTMIQAVKTGHEAIQVLCQGLTALGKV
AGKEKKLDTIKATPENLQIRVDELFSDRIDDMWSSGLGKEAQGKIMTDLYTAVVGELIED
YPGETVAIKGAFKDLLCRRMFFRAREEGLRCDGRGPTDIRQLTMETGLLPRVHGSALFTR
GETQCVATTTLGGSGMRQKIEKLDGTDEKRFYLQYTFPPSCVGETGRVGAPGRREVGHGN
LAERALIPTIPALADFPYTIRVESLITESHGSSSMASVCGGSLALMDAGVPIKAPVAGIA
MGMLLGDKGGVSDENAVILSDILGTEDALGTMDFKVAGDRVGISTFQLDIKCEGLTLETM
ESALEQARTGRLHLLSEMEKVIASPREELPATVPKMMSFSIPVEAIGKIIGPGGKQIRAI
IEDFELVNMDVGEEGGVQLSSFDTAKMGEAQTFITTLVRPEPVEGETYTGKITGIHPFGV
FLEILPGAEDGSYPGLEGLVHVSELAHERVRNCEGFMKSMNVEELTVKYLGKDKGKLQLS
RKALLEEQGGDGGRRNGSRGPSREAAAPTPEMTKDEIDVIAQAIEGVTEL

NT seq 2493 nt +upstreamnt +downstreamnt
atggcattcaatatgaagtttctcgctttgtttctcacgttctttcaaggcgaagaatgt
tgggctttccatccgattgcttcctttcgttcaggtcgtagcggtagaaaaggggtagac
ggctcagcctcgacatcgtcacgttgggcgtccgacggttccgggacagccttttcgatt
gaatcggaccacagcggacccgccggtttccccgtacaccgcgtcatatttcactcgctg
cccggtcaagagcaggatgttcctcctatttgcattgaaacgggaaagatcggacgacag
gcggcgggtgctgtcacattgactcgcggtgattccgttctctacgcgacaacgtcgcac
gacaaggaccccaaggaagaaatcgacttttgtcccctcagtgtggactaccaggaacga
ttcagttccgccgggctcacatccggtgggtacaacaaacgggacggacgtcccgctgaa
cacgaaattcttacctgtcgtctcattgaccgaccgctccggccattgattcagtcggga
tggcggcacgaaacgcagcttctctcctgggtcttgtcctacgatggggaacggtcctgc
gatcctcttgcgatcattgcttcggcctcgtcgctcttcatttccgatgtacccctgcac
aaacccgtggcggcggtgcaagtgggcatgaaggatgatggcacgttggtggtgaatcct
acaaatctacagatggagacgagcaagctcaacctgatggtggccggtaccgaagaagca
gttttgatgattgaaggagccgccgactttttaccagaatccacgatgattcaggccgtg
aaaacgggccatgaggcgattcaggtcctatgtcaagggctgaccgcgctaggaaaagtc
gccggaaaggaaaagaagctggatactattaaagctactccagagaacttgcaaattcga
gtagatgaacttttcagcgatcgtatcgatgatatgtggtcgtctggtctgggcaaagaa
gcccaagggaaaatcatgactgatttatacacggccgtagtcggcgagcttatcgaagac
tatcctggcgaaacggttgccatcaaaggcgcgtttaaagatctgttgtgtcgacgcatg
tttttccgtgcccgagaagaagggcttcgttgtgacggtcgtggaccgaccgacattcgt
cagcttacaatggagactgggttgctgccgcgtgtgcacgggtctgccctcttcacacga
ggtgaaacacagtgtgtcgccacgacaacactgggtggttccggcatgcgacaaaagatt
gaaaaactggacggaaccgatgagaagcgcttttatctgcagtatacgtttccgcctagt
tgcgttggtgagacgggccgagtgggagctccgggacgtcgagaagtcggacacggtaac
ctggcggaaagggccctgattccaaccataccagcactagctgatttcccttatacaatt
cgggtagagtctctcatcactgagtcgcacggttccagttccatggccagcgtctgtggc
ggatcactggctttaatggatgccggtgtacccatcaaagcacccgtggccggtattgca
atgggaatgctgctaggcgataaaggcggcgtatccgacgagaacgctgtaatactttcg
gatattcttggaaccgaggatgcacttggtactatggattttaaggttgcaggtgatcga
gttggaatatccacttttcaactggatatcaagtgtgaaggtttgactttggaaaccatg
gaaagcgcactggaacaagcacgcacgggccgcttacatttgttgtcggaaatggaaaag
gtaattgcctcaccgcgagaggagctccccgcaactgtcccaaaaatgatgtcgttttca
attcctgttgaggccattggtaagattattggaccaggtggtaaacagattcgtgctatc
atcgaagattttgagcttgtaaacatggacgtcggtgaagagggaggggtacagttatcc
tcgtttgatacagctaaaatgggagaagcccagacctttattactactttggttagaccg
gaacccgttgaaggtgaaacctacaccggaaaaattactggtattcatccgtttggagtt
tttcttgagattttgcccggtgccgaggacggttcttacccgggtcttgaaggattggtt
catgtctcggagctggcccacgagcgtgttcgaaactgcgaaggtttcatgaagagcatg
aatgttgaagaactgacggtcaagtatctcggtaaagacaagggtaaactgcagcttagt
cgaaaggctctactcgaagaacaaggtggagacggaggccgaagaaatggttctcgagga
ccgagtcgagaagcagccgcgccaactcccgaaatgacaaaagatgagatcgacgtgatt
gcgcaagctattgagggtgtaacagagctatag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-PTI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

Download RDF

DBGET integrated database retrieval system