KEGG   Phaeodactylum tricornutum: PHATRDRAFT_25
Entry
PHATRDRAFT_25     CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
pti  Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pti03400]
    PHATRDRAFT_25
Enzymes [BR:pti01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PHATRDRAFT_25
DNA repair and recombination proteins [BR:pti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    PHATRDRAFT_25
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C AAA_19 AAA_22 AAA_30
Other DBs
NCBI-GeneID: 7196786
NCBI-ProteinID: XP_002177337
JGI: 25
UniProt: B7FQ60
Position
1:complement(1642575..1647921)
AA seq 1589 aa
LPHGTIYESTDRMEKVIIPPADRNEANLHPRLRIHEVLETDPAKAFEGTVSLNPMQSSVF
EVAYLHRDNLLVCAPTGAGKTNVAMLSVVAHFRDVGLIASDRTTVLETGRKVIYIAPMKA
LAQEVVEKFSAKLKGLRLTVRELTGDMQLTRLQAEAAHVIVTTPEKWDVVTRKSGTDENA
LGNQCGLLIIDEVHLLADERGAVIESVVSRLHRLVESRQKQARIVGLSATLPNYQDVASF
LKVPERGLFFFGPEHRPVPLQQQFIGVSAGTKDRFAKEKRMNEICFDVVLDSLQRGYQVM
VFVHSRKGTGDTAKSLAEMASHEGVLERYFVTAGKEGSSGDAYSRHAEKVKKSRNREVGM
HFANGMGIHHAGMLRGDRKLTEQVFSDGAIKVLVCTATLAWQVFRGFRLPAHTVVIKGTE
VYNPEKGGVVDLSILDVQQIFGRAGRPQFDTSGEATMITSIDAFPRYMDKLVRAVPIESN
FIKHLADHLNAEVVGGTVTNIQEAVTWLTYTYLYTRMRRNPIGYGIKEDEKNSDPMLKGR
CNELVREAAKLLDLNRMIRYDQQSGNLSVADRGRVAAHFYIQSESIATFNEMLAMTDYYT
DADLCRVICNATEFRNLKIRQEEMSELEELVKTACPLPLKGAGMDDRGRGLITDASDKAF
VLLQAYISRAKIKSFTLITDMNYIASNASRVARAVFEICLKQNSAGPALKLLRIAKSADT
RIWWFQTPMRIFEDEFSESVYSSIETKSGGKGYDSLYSALSLLDMQPKEVEIYCRWNKSN
KGGRGGEKIQRFVRTLPNLHIECDVQPVTSSVMRFHILVTPNFEWNGRWHGGAQSFWLWV
EDGENNRIYHDESILFAKRTFPDAITLDLSIPAFEPMPSQYFIRAISDSWVGSEMLLPVS
LDHVQMVKDKTPITPVYDLSPVPVTSLAECKYEQLYRNFKCFNSIQSQLFHVLYHTDSPV
LLGAPTGSGKTIVAELALLRMKRIFPKGICVYIAPLKSLARERLKEWKIRLGSAPLRWKI
LELSGDTHHDQGVVESADVLVCTPEKWDLISRGWRSYVKAEASENAGKAFVKRVKLLVLD
EVHLLGEERGAVLEAIVSRTRFISQFVEEQNNAKTSKPKEDVTRIIGLSTALANPLDLAD
WIGIDTRNTGPTRMRGLYNFSSSVRPVPLTVHVQGYPGRHYCPRMATMNKPCFAAIKEYS
PAKPVLIFVASRRQTRLTAFDIISYAAAEANPKRFLKCNEEVVDAIINTVSDEALRHTLA
FGIGLHHAGISSHDRDVVETMYLSGKIQVLVATSTLAWGVNTPAHLVIVKGTEYFDGKSS
RYVDYPLTDVLQMIGRAGRPGFDDRGSAVVMSTEDKKPFYKKFLYSPFPVESCLTGRIHE
NLNAEIASGTIGSVLEAVGYLTWTFYARRVRANPSFYGAQSSSEEDVEHLLVSIVKSTLR
DLEDQGCVSIQSDELEAHVTTMPLGLATSNFYLLYRTPKQMQFVDEISLAWILYALASTH
EFDELPVRHNEDILNEELSANVRWGPDVDHLLSGDQSNAYRNPEIFSDPHTKCFLLLQAH
LEHAKLPISDYVNDTKSVVENIPRLLAAM
NT seq 4767 nt   +upstreamnt  +downstreamnt
ctaccacacggaaccatttatgaatctactgatcgcatggagaaggtaattattccacca
gcggaccggaatgaggccaatttgcaccctcgtctccgtatccatgaagttctcgaaaca
gacccggctaaggccttcgaagggacggtgtcgctaaacccaatgcaaagctctgtgttt
gaagtagcttatcttcaccgagacaaccttttggtatgtgcaccaactggtgccggcaaa
acgaatgttgccatgctgagtgttgtcgcccactttcgagacgttggtttgatcgcgtcc
gatcggactacagttctggaaacggggcgaaaggtaatatacatagctcctatgaaagcg
ttggctcaagaagtggtggaaaagttttccgccaaactgaaaggcttgcgcttgactgta
cgagagttgacgggtgatatgcaattaaccaggttacaagccgaagcagcacatgttatt
gttacaacaccagaaaaatgggatgttgtaactcgaaagtctgggactgacgaaaatgcg
cttggaaaccagtgcggtctgctgattatcgacgaagtccacttattggctgatgagcgc
ggtgcagtaattgaatccgtcgtttcgcgactacaccgcttggtcgaaagccgccagaag
caagcccgtattgtcgggctgtccgctaccttgccgaattatcaggacgttgcaagcttt
ttaaaggtacctgaacgcggtctcttcttctttgggcctgagcatcgtcctgttcctcta
cagcaacaatttattggagtttcggccgggacaaaggaccgatttgccaaagaaaaacgt
atgaatgagatttgcttcgatgtcgttttggattcattgcaacgcggctatcaagtcatg
gtttttgtgcattcacggaaagggactggagatactgccaagtctttggctgaaatggct
tcgcatgaaggagttttggaacggtattttgtaacggctggcaaagaaggttcaagcggt
gatgcctacagtcgccacgccgaaaaggtcaagaaatctagaaatcgtgaagtggggatg
cattttgctaatggtatggggatacatcatgccggcatgcttcgaggagaccgcaagctg
actgaacaagtgtttagcgatggtgcaataaaagttcttgtttgtactgcaactttagca
tggcaagtgtttagagggtttcgtttgccagcacacacagttgtgataaaaggaacggag
gtgtataatccagaaaaagggggcgtcgtcgatttgagtatactcgatgtccagcagatt
ttcggacgagccggtcgtccccaatttgatacctctggtgaagcaacaatgataacctcg
atagacgcttttccgcgctacatggataagttggttcgtgcagtaccaatcgagtctaac
ttcatcaaacatctagcagatcatttgaacgctgaggtcgtcggtggtacagtcacgaac
attcaggaagctgtgacctggttgacgtatacatatttgtacaccagaatgcgtcgaaac
ccaattggctatggaattaaagaggatgaaaaaaatagcgaccctatgctcaaagggcga
tgcaatgagcttgttcgcgaggctgctaagcttctggatttgaatcgaatgatacggtac
gatcagcagtccggtaacctttccgtcgcggatcgaggtcgcgttgctgcgcatttctac
attcaatcagagagcattgccacctttaacgagatgttagccatgacggactactatacg
gacgcagatctgtgccgggttatctgcaacgcaacagagtttcgaaatctgaaaattcgg
caagaagagatgagtgagctagaagaactagtcaaaaccgcgtgtcctttgccgctaaag
ggggctggcatggacgacagggggcgagggttgattaccgatgcgtctgacaaagccttt
gtccttcttcaggcatacatctctcgggcaaagataaaaagcttcacattgatcaccgat
atgaactacattgcatcgaatgcgagccgcgtagctcgagcagttttcgagatttgtctc
aagcagaactctgcaggtccggctctaaaacttcttcgcattgccaagagtgctgatacc
agaatttggtggtttcaaaccccaatgcgtatatttgaggacgaatttagtgaatcagtg
tattcgtcaattgaaacgaaaagtggagggaagggatacgattcgttgtactcggctttg
tctttgttggatatgcagcccaaagaagtcgagatatattgccggtggaacaaaagtaat
aaaggaggaaggggcggcgaaaagattcaacgctttgttcgaactttaccgaatttacat
attgaatgtgatgtacaacccgtgaccagcagtgtcatgcgcttccacattttggtgact
ccaaattttgaatggaatgggcgatggcatggtggtgcgcaatctttctggttatgggta
gaggacggtgagaacaatcgcatctatcatgacgaatccattctgttcgccaagcggaca
tttccagatgcaattactctcgacctgtctattcctgcattcgaaccgatgcctagtcag
tattttattcgtgctattagtgattcatgggttggaagtgagatgctattgcccgtatct
ctggatcacgtacaaatggtcaaagacaaaacacccattactccggtatacgacctctcc
cctgtccctgtaacttccttggcagagtgcaaatatgagcaactgtaccgcaactttaaa
tgtttcaattcgatccaatcacagcttttccacgtgctgtatcataccgattcgcccgta
ctgctgggtgctccaactggctcagggaagacaatcgtcgctgagcttgctcttttacga
atgaaacgcattttcccgaagggtatttgtgtctacattgctccattgaagtcacttgct
agagaacggctaaaggaatggaaaattcgcctcggatctgctcctctacgctggaaaatt
ttggagctcagtggcgacacccaccacgatcaaggtgtggtcgaaagcgctgatgtactt
gtctgtacaccagaaaaatgggacctcatttcgagaggttggcgatcatatgtgaaagct
gaagcaagcgaaaacgccggcaaagcgttcgtgaagagggttaaattgcttgtcctggac
gaagttcatttgcttggcgaagaaaggggagctgtcctggaagcgattgtgagtagaact
agattcatttcccaatttgtcgaggaacaaaacaacgccaagacttcaaaaccgaaagaa
gatgtcactaggataattggcctctcaacggctctcgcgaatcctttggatcttgctgac
tggattggaattgatacaagaaatacaggtccgactagaatgagaggtctttacaacttt
agctcatctgtccgcccagttccattaactgttcatgttcaagggtacccaggacggcac
tactgtcctcgaatggcaacgatgaacaagccctgctttgccgccatcaaagagtactca
ccggcaaagccagtgctcatctttgttgcctcacggcgccaaaccaggcttaccgctttt
gacatcatcagctatgcagcggctgaggcgaatccaaaacggtttttaaaatgcaacgag
gaggttgtcgacgcaatcatcaatacagtgagcgacgaagccctccggcatactttagca
ttcggaatcggtcttcaccacgctggtatttcctcgcatgatcgagacgttgtggaaacg
atgtacctttctgggaagattcaagtgcttgtggctaccagtaccctagcttggggtgtg
aacactccggcacatttagtgattgtaaaggggacagaatattttgacggcaaatcgtcc
cgatacgtggactacccccttacggatgtattgcaaatgatagggagagctggacgaccg
ggtttcgacgacagaggctctgcagtcgtcatgagtactgaagataagaagccgttttac
aagaagtttctctactcgccattccccgttgagtcctgtcttacaggacgtatccacgaa
aatttaaatgcagaaattgccagtggaaccattgggtcagttcttgaggccgtgggttat
cttacgtggactttctacgccagaagagtccgggcaaatccgtctttttatggtgcacag
tcgagcagcgaagaggacgtagagcatcttcttgtatccattgtcaagagtacattgcga
gatctcgaggatcaagggtgcgtttcgattcaaagcgatgaattagaagcacatgtaaca
accatgccccttggtctggctacatcaaatttttatttgctttatagaacaccaaagcaa
atgcaatttgtcgacgagatttccttggcatggattttatatgctctcgcttcgacccat
gagtttgatgagcttcctgttcgtcacaacgaagacatattaaatgaagaactcagcgca
aacgtgcgctggggaccggatgtggaccacttactttccggcgatcaaagtaacgcatat
cggaacccagagatttttagtgatccgcataccaaatgctttcttcttctacaagcacat
ctggaacatgccaagcttcctataagtgactacgtgaacgacacaaaaagcgtcgtcgaa
aacatcccgcgtctgcttgccgccatg

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (91)   
   KEGG ORTHOLOGY (1)   
   RefGene (86)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (106)   

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